Gene : Bostr.29246s0003 B. stricta v1.2
Defline:  (1 of 2) 1.6.5.9//1.6.99.3 - NADH:ubiquinone reductase (non-electrogenic) / Ubiquinone reductase // NADH dehydrogenase / Type I dehydrogenase Genomic Order:  3
Name:  ? Bostr.29246s0003 Secondary Identifier:  ? PAC:30655688
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstricta PWY-7279 Boechera stricta pathologic  

Genomics

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Gene Structure Displayer

Expression

Correlated Expression Displayer

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.29246s0003 0.5kb upstream 0.5kb upstream 3261 true Scaffold29246: 27764-31024 Boechera stricta
Bostr.29246s0003 0.5kb upstream 0.5kb upstream 500 false Scaffold29246: 30525-31024 Boechera stricta
Bostr.29246s0003 0.5kb downstream 0.5kb downstream 3261 true Scaffold29246: 27264-30524 Boechera stricta
Bostr.29246s0003 0.5kb downstream 0.5kb downstream 500 false Scaffold29246: 27264-27763 Boechera stricta
Bostr.29246s0003 1.0kb upstream 1.0kb upstream 3761 true Scaffold29246: 27764-31524 Boechera stricta
Bostr.29246s0003 1.0kb upstream 1.0kb upstream 1000 false Scaffold29246: 30525-31524 Boechera stricta
Bostr.29246s0003 1.0kb downstream 1.0kb downstream 3761 true Scaffold29246: 26764-30524 Boechera stricta
Bostr.29246s0003 1.0kb downstream 1.0kb downstream 1000 false Scaffold29246: 26764-27763 Boechera stricta
Bostr.29246s0003 2.0kb upstream 2.0kb upstream 4761 true Scaffold29246: 27764-32524 Boechera stricta
Bostr.29246s0003 2.0kb upstream 2.0kb upstream 2000 false Scaffold29246: 30525-32524 Boechera stricta
Bostr.29246s0003 2.0kb downstream 2.0kb downstream 4761 true Scaffold29246: 25764-30524 Boechera stricta
Bostr.29246s0003 2.0kb downstream 2.0kb downstream 2000 false Scaffold29246: 25764-27763 Boechera stricta
Bostr.29246s0003 5.0kb upstream 5.0kb upstream 7761 true Scaffold29246: 27764-35524 Boechera stricta
Bostr.29246s0003 5.0kb upstream 5.0kb upstream 5000 false Scaffold29246: 30525-35524 Boechera stricta
Bostr.29246s0003 5.0kb downstream 5.0kb downstream 7761 true Scaffold29246: 22764-30524 Boechera stricta
Bostr.29246s0003 5.0kb downstream 5.0kb downstream 5000 false Scaffold29246: 22764-27763 Boechera stricta
Bostr.29246s0003 10.0kb upstream 10.0kb upstream 12761 true Scaffold29246: 27764-40524 Boechera stricta
Bostr.29246s0003 10.0kb upstream 10.0kb upstream 10000 false Scaffold29246: 30525-40524 Boechera stricta
Bostr.29246s0003 10.0kb downstream 10.0kb downstream 12761 true Scaffold29246: 17764-30524 Boechera stricta
Bostr.29246s0003 10.0kb downstream 10.0kb downstream 10000 false Scaffold29246: 17764-27763 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361481 5261 Brassicaceae View MSA
123838919 5264 Brassicales-Malvales View MSA
124340078 5266 SBM View MSA
124246164 5268 Malvidae View MSA
124062110 5270 Rosid View MSA
123742437 5271 Pentapetalae View MSA
122794116 5272 Eudicot View MSA
122050116 5273 Angiosperm View MSA
121344067 5274 Embryophyte View MSA
123427504 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain