Gene : Bostr.29827s0004 B. stricta v1.2
Defline:  (1 of 5) PTHR31165:SF13 - PROTEIN LIGHT-DEPENDENT SHORT HYPOCOTYLS 1-RELATED Genomic Order:  4
Name:  ? Bostr.29827s0004 Secondary Identifier:  ? PAC:30679599
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Ontology Annotation Displayer

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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.29827s0004 0.5kb upstream 0.5kb upstream 1763 true Scaffold29827: 103889-105651 Boechera stricta
Bostr.29827s0004 0.5kb upstream 0.5kb upstream 500 false Scaffold29827: 103889-104388 Boechera stricta
Bostr.29827s0004 0.5kb downstream 0.5kb downstream 1763 true Scaffold29827: 104389-106151 Boechera stricta
Bostr.29827s0004 0.5kb downstream 0.5kb downstream 500 false Scaffold29827: 105652-106151 Boechera stricta
Bostr.29827s0004 1.0kb upstream 1.0kb upstream 2263 true Scaffold29827: 103389-105651 Boechera stricta
Bostr.29827s0004 1.0kb upstream 1.0kb upstream 1000 false Scaffold29827: 103389-104388 Boechera stricta
Bostr.29827s0004 1.0kb downstream 1.0kb downstream 2263 true Scaffold29827: 104389-106651 Boechera stricta
Bostr.29827s0004 1.0kb downstream 1.0kb downstream 1000 false Scaffold29827: 105652-106651 Boechera stricta
Bostr.29827s0004 2.0kb upstream 2.0kb upstream 3263 true Scaffold29827: 102389-105651 Boechera stricta
Bostr.29827s0004 2.0kb upstream 2.0kb upstream 2000 false Scaffold29827: 102389-104388 Boechera stricta
Bostr.29827s0004 2.0kb downstream 2.0kb downstream 3263 true Scaffold29827: 104389-107651 Boechera stricta
Bostr.29827s0004 2.0kb downstream 2.0kb downstream 2000 false Scaffold29827: 105652-107651 Boechera stricta
Bostr.29827s0004 5.0kb upstream 5.0kb upstream 6263 true Scaffold29827: 99389-105651 Boechera stricta
Bostr.29827s0004 5.0kb upstream 5.0kb upstream 5000 false Scaffold29827: 99389-104388 Boechera stricta
Bostr.29827s0004 5.0kb downstream 5.0kb downstream 6263 true Scaffold29827: 104389-110651 Boechera stricta
Bostr.29827s0004 5.0kb downstream 5.0kb downstream 5000 false Scaffold29827: 105652-110651 Boechera stricta
Bostr.29827s0004 10.0kb upstream 10.0kb upstream 11263 true Scaffold29827: 94389-105651 Boechera stricta
Bostr.29827s0004 10.0kb upstream 10.0kb upstream 10000 false Scaffold29827: 94389-104388 Boechera stricta
Bostr.29827s0004 10.0kb downstream 10.0kb downstream 11263 true Scaffold29827: 104389-115651 Boechera stricta
Bostr.29827s0004 10.0kb downstream 10.0kb downstream 10000 false Scaffold29827: 105652-115651 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377291 5261 Brassicaceae View MSA
123839186 5264 Brassicales-Malvales View MSA
124337661 5266 SBM View MSA
124244960 5268 Malvidae View MSA
124063298 5270 Rosid View MSA
123753170 5271 Pentapetalae View MSA
122789282 5272 Eudicot View MSA
122049887 5273 Angiosperm View MSA
121351474 5274 Embryophyte View MSA
123382179 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain