Gene : Bostr.2983s0113 B. stricta v1.2
Defline:  (1 of 2) 1.10.9.1 - Plastoquinol--plastocyanin reductase / Cytochrome b6f complex Genomic Order:  113
Name:  ? Bostr.2983s0113 Secondary Identifier:  ? PAC:30662852
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstricta PHOTOALL-PWY Boechera stricta pathologic  
Bstricta PWY-101 Boechera stricta pathologic  

Genomics

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Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.2983s0113 0.5kb upstream 0.5kb upstream 2202 true Scaffold2983: 703440-705641 Boechera stricta
Bostr.2983s0113 0.5kb upstream 0.5kb upstream 500 false Scaffold2983: 705142-705641 Boechera stricta
Bostr.2983s0113 0.5kb downstream 0.5kb downstream 2202 true Scaffold2983: 702940-705141 Boechera stricta
Bostr.2983s0113 0.5kb downstream 0.5kb downstream 500 false Scaffold2983: 702940-703439 Boechera stricta
Bostr.2983s0113 1.0kb upstream 1.0kb upstream 2702 true Scaffold2983: 703440-706141 Boechera stricta
Bostr.2983s0113 1.0kb upstream 1.0kb upstream 1000 false Scaffold2983: 705142-706141 Boechera stricta
Bostr.2983s0113 1.0kb downstream 1.0kb downstream 2702 true Scaffold2983: 702440-705141 Boechera stricta
Bostr.2983s0113 1.0kb downstream 1.0kb downstream 1000 false Scaffold2983: 702440-703439 Boechera stricta
Bostr.2983s0113 2.0kb upstream 2.0kb upstream 3702 true Scaffold2983: 703440-707141 Boechera stricta
Bostr.2983s0113 2.0kb upstream 2.0kb upstream 2000 false Scaffold2983: 705142-707141 Boechera stricta
Bostr.2983s0113 2.0kb downstream 2.0kb downstream 3702 true Scaffold2983: 701440-705141 Boechera stricta
Bostr.2983s0113 2.0kb downstream 2.0kb downstream 2000 false Scaffold2983: 701440-703439 Boechera stricta
Bostr.2983s0113 5.0kb upstream 5.0kb upstream 6702 true Scaffold2983: 703440-710141 Boechera stricta
Bostr.2983s0113 5.0kb upstream 5.0kb upstream 5000 false Scaffold2983: 705142-710141 Boechera stricta
Bostr.2983s0113 5.0kb downstream 5.0kb downstream 6702 true Scaffold2983: 698440-705141 Boechera stricta
Bostr.2983s0113 5.0kb downstream 5.0kb downstream 5000 false Scaffold2983: 698440-703439 Boechera stricta
Bostr.2983s0113 10.0kb upstream 10.0kb upstream 11702 true Scaffold2983: 703440-715141 Boechera stricta
Bostr.2983s0113 10.0kb upstream 10.0kb upstream 10000 false Scaffold2983: 705142-715141 Boechera stricta
Bostr.2983s0113 10.0kb downstream 10.0kb downstream 11702 true Scaffold2983: 693440-705141 Boechera stricta
Bostr.2983s0113 10.0kb downstream 10.0kb downstream 10000 false Scaffold2983: 693440-703439 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377793 5261 Brassicaceae View MSA
123831988 5264 Brassicales-Malvales View MSA
124337057 5266 SBM View MSA
124239989 5268 Malvidae View MSA
124073060 5270 Rosid View MSA
123737463 5271 Pentapetalae View MSA
122790798 5272 Eudicot View MSA
122045987 5273 Angiosperm View MSA
121343796 5274 Embryophyte View MSA
123424591 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain