Gene : Bostr.2983s0158 B. stricta v1.2
Defline:  (1 of 6) PTHR31235:SF27 - PEROXIDASE 62-RELATED Genomic Order:  158
Name:  ? Bostr.2983s0158 Secondary Identifier:  ? PAC:30662968
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstricta PWY-5466 Boechera stricta pathologic  
Bstricta PWY-7214 Boechera stricta pathologic  
Bstricta PWY-7445 Boechera stricta pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.2983s0158 0.5kb upstream 0.5kb upstream 908 true Scaffold2983: 961563-962470 Boechera stricta
Bostr.2983s0158 0.5kb upstream 0.5kb upstream 500 false Scaffold2983: 961971-962470 Boechera stricta
Bostr.2983s0158 0.5kb downstream 0.5kb downstream 908 true Scaffold2983: 961063-961970 Boechera stricta
Bostr.2983s0158 0.5kb downstream 0.5kb downstream 500 false Scaffold2983: 961063-961562 Boechera stricta
Bostr.2983s0158 1.0kb upstream 1.0kb upstream 1408 true Scaffold2983: 961563-962970 Boechera stricta
Bostr.2983s0158 1.0kb upstream 1.0kb upstream 1000 false Scaffold2983: 961971-962970 Boechera stricta
Bostr.2983s0158 1.0kb downstream 1.0kb downstream 1408 true Scaffold2983: 960563-961970 Boechera stricta
Bostr.2983s0158 1.0kb downstream 1.0kb downstream 1000 false Scaffold2983: 960563-961562 Boechera stricta
Bostr.2983s0158 2.0kb upstream 2.0kb upstream 2408 true Scaffold2983: 961563-963970 Boechera stricta
Bostr.2983s0158 2.0kb upstream 2.0kb upstream 2000 false Scaffold2983: 961971-963970 Boechera stricta
Bostr.2983s0158 2.0kb downstream 2.0kb downstream 2408 true Scaffold2983: 959563-961970 Boechera stricta
Bostr.2983s0158 2.0kb downstream 2.0kb downstream 2000 false Scaffold2983: 959563-961562 Boechera stricta
Bostr.2983s0158 5.0kb upstream 5.0kb upstream 5408 true Scaffold2983: 961563-966970 Boechera stricta
Bostr.2983s0158 5.0kb upstream 5.0kb upstream 5000 false Scaffold2983: 961971-966970 Boechera stricta
Bostr.2983s0158 5.0kb downstream 5.0kb downstream 5408 true Scaffold2983: 956563-961970 Boechera stricta
Bostr.2983s0158 5.0kb downstream 5.0kb downstream 5000 false Scaffold2983: 956563-961562 Boechera stricta
Bostr.2983s0158 10.0kb upstream 10.0kb upstream 10408 true Scaffold2983: 961563-971970 Boechera stricta
Bostr.2983s0158 10.0kb upstream 10.0kb upstream 10000 false Scaffold2983: 961971-971970 Boechera stricta
Bostr.2983s0158 10.0kb downstream 10.0kb downstream 10408 true Scaffold2983: 951563-961970 Boechera stricta
Bostr.2983s0158 10.0kb downstream 10.0kb downstream 10000 false Scaffold2983: 951563-961562 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122380905 5261 Brassicaceae View MSA
123840732 5264 Brassicales-Malvales View MSA
124322777 5266 SBM View MSA
124249587 5268 Malvidae View MSA
124074807 5270 Rosid View MSA
123752607 5271 Pentapetalae View MSA
122796741 5272 Eudicot View MSA
122051577 5273 Angiosperm View MSA
121351674 5274 Embryophyte View MSA
123426672 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain