Gene : Bostr.30275s0133 B. stricta v1.2
Defline:  (1 of 1) PTHR11062:SF59 - EXOSTOSIN FAMILY PROTEIN Genomic Order:  133
Name:  ? Bostr.30275s0133 Secondary Identifier:  ? PAC:30665317
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstricta PWY-5980 Boechera stricta pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.30275s0133 0.5kb upstream 0.5kb upstream 2885 true Scaffold30275: 838705-841589 Boechera stricta
Bostr.30275s0133 0.5kb upstream 0.5kb upstream 500 false Scaffold30275: 838705-839204 Boechera stricta
Bostr.30275s0133 0.5kb downstream 0.5kb downstream 2885 true Scaffold30275: 839205-842089 Boechera stricta
Bostr.30275s0133 0.5kb downstream 0.5kb downstream 500 false Scaffold30275: 841590-842089 Boechera stricta
Bostr.30275s0133 1.0kb upstream 1.0kb upstream 3385 true Scaffold30275: 838205-841589 Boechera stricta
Bostr.30275s0133 1.0kb upstream 1.0kb upstream 1000 false Scaffold30275: 838205-839204 Boechera stricta
Bostr.30275s0133 1.0kb downstream 1.0kb downstream 3385 true Scaffold30275: 839205-842589 Boechera stricta
Bostr.30275s0133 1.0kb downstream 1.0kb downstream 1000 false Scaffold30275: 841590-842589 Boechera stricta
Bostr.30275s0133 2.0kb upstream 2.0kb upstream 4385 true Scaffold30275: 837205-841589 Boechera stricta
Bostr.30275s0133 2.0kb upstream 2.0kb upstream 2000 false Scaffold30275: 837205-839204 Boechera stricta
Bostr.30275s0133 2.0kb downstream 2.0kb downstream 4385 true Scaffold30275: 839205-843589 Boechera stricta
Bostr.30275s0133 2.0kb downstream 2.0kb downstream 2000 false Scaffold30275: 841590-843589 Boechera stricta
Bostr.30275s0133 5.0kb upstream 5.0kb upstream 7385 true Scaffold30275: 834205-841589 Boechera stricta
Bostr.30275s0133 5.0kb upstream 5.0kb upstream 5000 false Scaffold30275: 834205-839204 Boechera stricta
Bostr.30275s0133 5.0kb downstream 5.0kb downstream 7385 true Scaffold30275: 839205-846589 Boechera stricta
Bostr.30275s0133 5.0kb downstream 5.0kb downstream 5000 false Scaffold30275: 841590-846589 Boechera stricta
Bostr.30275s0133 10.0kb upstream 10.0kb upstream 12385 true Scaffold30275: 829205-841589 Boechera stricta
Bostr.30275s0133 10.0kb upstream 10.0kb upstream 10000 false Scaffold30275: 829205-839204 Boechera stricta
Bostr.30275s0133 10.0kb downstream 10.0kb downstream 12385 true Scaffold30275: 839205-851589 Boechera stricta
Bostr.30275s0133 10.0kb downstream 10.0kb downstream 10000 false Scaffold30275: 841590-851589 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374619 5261 Brassicaceae View MSA
123829606 5264 Brassicales-Malvales View MSA
124346076 5266 SBM View MSA
124243747 5268 Malvidae View MSA
124063167 5270 Rosid View MSA
123741138 5271 Pentapetalae View MSA
122789943 5272 Eudicot View MSA
122046187 5273 Angiosperm View MSA
121349832 5274 Embryophyte View MSA
123428712 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain