Gene : Bostr.30275s0101 B. stricta v1.2
Defline:  (1 of 1) PTHR23315:SF129 - ARMADILLO/BETA-CATENIN-LIKE REPEAT-CONTAINING PROTEIN Genomic Order:  101
Name:  ? Bostr.30275s0101 Secondary Identifier:  ? PAC:30665009
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstricta PWY-7511 Boechera stricta pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.30275s0101 0.5kb upstream 0.5kb upstream 2697 true Scaffold30275: 666226-668922 Boechera stricta
Bostr.30275s0101 0.5kb upstream 0.5kb upstream 500 false Scaffold30275: 668423-668922 Boechera stricta
Bostr.30275s0101 0.5kb downstream 0.5kb downstream 2697 true Scaffold30275: 665726-668422 Boechera stricta
Bostr.30275s0101 0.5kb downstream 0.5kb downstream 500 false Scaffold30275: 665726-666225 Boechera stricta
Bostr.30275s0101 1.0kb upstream 1.0kb upstream 3197 true Scaffold30275: 666226-669422 Boechera stricta
Bostr.30275s0101 1.0kb upstream 1.0kb upstream 1000 false Scaffold30275: 668423-669422 Boechera stricta
Bostr.30275s0101 1.0kb downstream 1.0kb downstream 3197 true Scaffold30275: 665226-668422 Boechera stricta
Bostr.30275s0101 1.0kb downstream 1.0kb downstream 1000 false Scaffold30275: 665226-666225 Boechera stricta
Bostr.30275s0101 2.0kb upstream 2.0kb upstream 4197 true Scaffold30275: 666226-670422 Boechera stricta
Bostr.30275s0101 2.0kb upstream 2.0kb upstream 2000 false Scaffold30275: 668423-670422 Boechera stricta
Bostr.30275s0101 2.0kb downstream 2.0kb downstream 4197 true Scaffold30275: 664226-668422 Boechera stricta
Bostr.30275s0101 2.0kb downstream 2.0kb downstream 2000 false Scaffold30275: 664226-666225 Boechera stricta
Bostr.30275s0101 5.0kb upstream 5.0kb upstream 7197 true Scaffold30275: 666226-673422 Boechera stricta
Bostr.30275s0101 5.0kb upstream 5.0kb upstream 5000 false Scaffold30275: 668423-673422 Boechera stricta
Bostr.30275s0101 5.0kb downstream 5.0kb downstream 7197 true Scaffold30275: 661226-668422 Boechera stricta
Bostr.30275s0101 5.0kb downstream 5.0kb downstream 5000 false Scaffold30275: 661226-666225 Boechera stricta
Bostr.30275s0101 10.0kb upstream 10.0kb upstream 12197 true Scaffold30275: 666226-678422 Boechera stricta
Bostr.30275s0101 10.0kb upstream 10.0kb upstream 10000 false Scaffold30275: 668423-678422 Boechera stricta
Bostr.30275s0101 10.0kb downstream 10.0kb downstream 12197 true Scaffold30275: 656226-668422 Boechera stricta
Bostr.30275s0101 10.0kb downstream 10.0kb downstream 10000 false Scaffold30275: 656226-666225 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363455 5261 Brassicaceae View MSA
123830839 5264 Brassicales-Malvales View MSA
124336587 5266 SBM View MSA
124239791 5268 Malvidae View MSA
124065443 5270 Rosid View MSA
123751031 5271 Pentapetalae View MSA
122790381 5272 Eudicot View MSA
122043929 5273 Angiosperm View MSA
121350406 5274 Embryophyte View MSA
123428864 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain