Gene : Bostr.30287s0001 B. stricta v1.2
Defline:  (1 of 5) 2.3.3.8 - ATP citrate synthase / Citric cleavage enzyme Genomic Order:  1
Name:  ? Bostr.30287s0001 Secondary Identifier:  ? PAC:30669784
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstricta PWY-5172 Boechera stricta pathologic  
Bstricta PWY-5173 Boechera stricta pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.30287s0001 0.5kb upstream 0.5kb upstream 3642 true Scaffold30287: 356-3997 Boechera stricta
Bostr.30287s0001 0.5kb upstream 0.5kb upstream 500 false Scaffold30287: 356-855 Boechera stricta
Bostr.30287s0001 0.5kb downstream 0.5kb downstream 3642 true Scaffold30287: 856-4497 Boechera stricta
Bostr.30287s0001 0.5kb downstream 0.5kb downstream 500 false Scaffold30287: 3998-4497 Boechera stricta
Bostr.30287s0001 1.0kb upstream 1.0kb upstream 3997 true Scaffold30287: 1-3997 Boechera stricta
Bostr.30287s0001 1.0kb upstream 1.0kb upstream 855 false Scaffold30287: 1-855 Boechera stricta
Bostr.30287s0001 1.0kb downstream 1.0kb downstream 4142 true Scaffold30287: 856-4997 Boechera stricta
Bostr.30287s0001 1.0kb downstream 1.0kb downstream 1000 false Scaffold30287: 3998-4997 Boechera stricta
Bostr.30287s0001 2.0kb upstream 2.0kb upstream 3997 true Scaffold30287: 1-3997 Boechera stricta
Bostr.30287s0001 2.0kb upstream 2.0kb upstream 855 false Scaffold30287: 1-855 Boechera stricta
Bostr.30287s0001 2.0kb downstream 2.0kb downstream 5122 true Scaffold30287: 856-5977 Boechera stricta
Bostr.30287s0001 2.0kb downstream 2.0kb downstream 1980 false Scaffold30287: 3998-5977 Boechera stricta
Bostr.30287s0001 5.0kb upstream 5.0kb upstream 3997 true Scaffold30287: 1-3997 Boechera stricta
Bostr.30287s0001 5.0kb upstream 5.0kb upstream 855 false Scaffold30287: 1-855 Boechera stricta
Bostr.30287s0001 5.0kb downstream 5.0kb downstream 5122 true Scaffold30287: 856-5977 Boechera stricta
Bostr.30287s0001 5.0kb downstream 5.0kb downstream 1980 false Scaffold30287: 3998-5977 Boechera stricta
Bostr.30287s0001 10.0kb upstream 10.0kb upstream 3997 true Scaffold30287: 1-3997 Boechera stricta
Bostr.30287s0001 10.0kb upstream 10.0kb upstream 855 false Scaffold30287: 1-855 Boechera stricta
Bostr.30287s0001 10.0kb downstream 10.0kb downstream 5122 true Scaffold30287: 856-5977 Boechera stricta
Bostr.30287s0001 10.0kb downstream 10.0kb downstream 1980 false Scaffold30287: 3998-5977 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122376063 5261 Brassicaceae View MSA
123830903 5264 Brassicales-Malvales View MSA
124337063 5266 SBM View MSA
124245104 5268 Malvidae View MSA
124068086 5270 Rosid View MSA
123744939 5271 Pentapetalae View MSA
122786148 5272 Eudicot View MSA
122042565 5273 Angiosperm View MSA
121348583 5274 Embryophyte View MSA
123428169 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain