Gene : Bostr.30275s0408 B. stricta v1.2
Defline:  (1 of 2) PTHR24286:SF10 - ABSCISIC ACID 8'-HYDROXYLASE 1-RELATED Genomic Order:  408
Name:  ? Bostr.30275s0408 Secondary Identifier:  ? PAC:30665409
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstricta PWY-5271 Boechera stricta pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.30275s0408 0.5kb upstream 0.5kb upstream 3145 true Scaffold30275: 2509321-2512465 Boechera stricta
Bostr.30275s0408 0.5kb upstream 0.5kb upstream 500 false Scaffold30275: 2509321-2509820 Boechera stricta
Bostr.30275s0408 0.5kb downstream 0.5kb downstream 3145 true Scaffold30275: 2509821-2512965 Boechera stricta
Bostr.30275s0408 0.5kb downstream 0.5kb downstream 500 false Scaffold30275: 2512466-2512965 Boechera stricta
Bostr.30275s0408 1.0kb upstream 1.0kb upstream 3645 true Scaffold30275: 2508821-2512465 Boechera stricta
Bostr.30275s0408 1.0kb upstream 1.0kb upstream 1000 false Scaffold30275: 2508821-2509820 Boechera stricta
Bostr.30275s0408 1.0kb downstream 1.0kb downstream 3645 true Scaffold30275: 2509821-2513465 Boechera stricta
Bostr.30275s0408 1.0kb downstream 1.0kb downstream 1000 false Scaffold30275: 2512466-2513465 Boechera stricta
Bostr.30275s0408 2.0kb upstream 2.0kb upstream 4645 true Scaffold30275: 2507821-2512465 Boechera stricta
Bostr.30275s0408 2.0kb upstream 2.0kb upstream 2000 false Scaffold30275: 2507821-2509820 Boechera stricta
Bostr.30275s0408 2.0kb downstream 2.0kb downstream 4645 true Scaffold30275: 2509821-2514465 Boechera stricta
Bostr.30275s0408 2.0kb downstream 2.0kb downstream 2000 false Scaffold30275: 2512466-2514465 Boechera stricta
Bostr.30275s0408 5.0kb upstream 5.0kb upstream 7645 true Scaffold30275: 2504821-2512465 Boechera stricta
Bostr.30275s0408 5.0kb upstream 5.0kb upstream 5000 false Scaffold30275: 2504821-2509820 Boechera stricta
Bostr.30275s0408 5.0kb downstream 5.0kb downstream 7645 true Scaffold30275: 2509821-2517465 Boechera stricta
Bostr.30275s0408 5.0kb downstream 5.0kb downstream 5000 false Scaffold30275: 2512466-2517465 Boechera stricta
Bostr.30275s0408 10.0kb upstream 10.0kb upstream 12645 true Scaffold30275: 2499821-2512465 Boechera stricta
Bostr.30275s0408 10.0kb upstream 10.0kb upstream 10000 false Scaffold30275: 2499821-2509820 Boechera stricta
Bostr.30275s0408 10.0kb downstream 10.0kb downstream 12645 true Scaffold30275: 2509821-2522465 Boechera stricta
Bostr.30275s0408 10.0kb downstream 10.0kb downstream 10000 false Scaffold30275: 2512466-2522465 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366969 5261 Brassicaceae View MSA
123839116 5264 Brassicales-Malvales View MSA
124341154 5266 SBM View MSA
124251238 5268 Malvidae View MSA
124067549 5270 Rosid View MSA
123747407 5271 Pentapetalae View MSA
122789954 5272 Eudicot View MSA
122044932 5273 Angiosperm View MSA
123429088 5275 Viridiplantae View MSA
121350004 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain