Gene : Bostr.3288s0204 B. stricta v1.2

Defline:  (1 of 5) PTHR31604:SF3 - PROTEIN SHI RELATED SEQUENCE 1-RELATED Genomic Order:  204
Name:  ? Bostr.3288s0204 Secondary Identifier:  ? PAC:30675419

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.3288s0204 0.5kb upstream 0.5kb upstream 2464 true Scaffold3288: 1003927-1006390 Boechera stricta
Bostr.3288s0204 0.5kb upstream 0.5kb upstream 500 false Scaffold3288: 1005891-1006390 Boechera stricta
Bostr.3288s0204 0.5kb downstream 0.5kb downstream 2464 true Scaffold3288: 1003427-1005890 Boechera stricta
Bostr.3288s0204 0.5kb downstream 0.5kb downstream 500 false Scaffold3288: 1003427-1003926 Boechera stricta
Bostr.3288s0204 1.0kb upstream 1.0kb upstream 2964 true Scaffold3288: 1003927-1006890 Boechera stricta
Bostr.3288s0204 1.0kb upstream 1.0kb upstream 1000 false Scaffold3288: 1005891-1006890 Boechera stricta
Bostr.3288s0204 1.0kb downstream 1.0kb downstream 2964 true Scaffold3288: 1002927-1005890 Boechera stricta
Bostr.3288s0204 1.0kb downstream 1.0kb downstream 1000 false Scaffold3288: 1002927-1003926 Boechera stricta
Bostr.3288s0204 2.0kb upstream 2.0kb upstream 3964 true Scaffold3288: 1003927-1007890 Boechera stricta
Bostr.3288s0204 2.0kb upstream 2.0kb upstream 2000 false Scaffold3288: 1005891-1007890 Boechera stricta
Bostr.3288s0204 2.0kb downstream 2.0kb downstream 3964 true Scaffold3288: 1001927-1005890 Boechera stricta
Bostr.3288s0204 2.0kb downstream 2.0kb downstream 2000 false Scaffold3288: 1001927-1003926 Boechera stricta
Bostr.3288s0204 5.0kb upstream 5.0kb upstream 6964 true Scaffold3288: 1003927-1010890 Boechera stricta
Bostr.3288s0204 5.0kb upstream 5.0kb upstream 5000 false Scaffold3288: 1005891-1010890 Boechera stricta
Bostr.3288s0204 5.0kb downstream 5.0kb downstream 6964 true Scaffold3288: 998927-1005890 Boechera stricta
Bostr.3288s0204 5.0kb downstream 5.0kb downstream 5000 false Scaffold3288: 998927-1003926 Boechera stricta
Bostr.3288s0204 10.0kb upstream 10.0kb upstream 11964 true Scaffold3288: 1003927-1015890 Boechera stricta
Bostr.3288s0204 10.0kb upstream 10.0kb upstream 10000 false Scaffold3288: 1005891-1015890 Boechera stricta
Bostr.3288s0204 10.0kb downstream 10.0kb downstream 11964 true Scaffold3288: 993927-1005890 Boechera stricta
Bostr.3288s0204 10.0kb downstream 10.0kb downstream 10000 false Scaffold3288: 993927-1003926 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364032 5261 Brassicaceae View MSA
123838633 5264 Brassicales-Malvales View MSA
124340064 5266 SBM View MSA
124251663 5268 Malvidae View MSA
124067577 5270 Rosid View MSA
123749314 5271 Pentapetalae View MSA
122796752 5272 Eudicot View MSA
122049669 5273 Angiosperm View MSA
121344202 5274 Embryophyte View MSA
123379999 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain