Gene : Bostr.3288s0093 B. stricta v1.2
Defline:  (1 of 1) 1.3.1.83 - Geranylgeranyl diphosphate reductase / Geranylgeranyl reductase Genomic Order:  93
Name:  ? Bostr.3288s0093 Secondary Identifier:  ? PAC:30675376
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstricta PWY-5063 Boechera stricta pathologic  
Bstricta PWY-5064 Boechera stricta pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.3288s0093 0.5kb upstream 0.5kb upstream 2283 true Scaffold3288: 459825-462107 Boechera stricta
Bostr.3288s0093 0.5kb upstream 0.5kb upstream 500 false Scaffold3288: 459825-460324 Boechera stricta
Bostr.3288s0093 0.5kb downstream 0.5kb downstream 2283 true Scaffold3288: 460325-462607 Boechera stricta
Bostr.3288s0093 0.5kb downstream 0.5kb downstream 500 false Scaffold3288: 462108-462607 Boechera stricta
Bostr.3288s0093 1.0kb upstream 1.0kb upstream 2783 true Scaffold3288: 459325-462107 Boechera stricta
Bostr.3288s0093 1.0kb upstream 1.0kb upstream 1000 false Scaffold3288: 459325-460324 Boechera stricta
Bostr.3288s0093 1.0kb downstream 1.0kb downstream 2783 true Scaffold3288: 460325-463107 Boechera stricta
Bostr.3288s0093 1.0kb downstream 1.0kb downstream 1000 false Scaffold3288: 462108-463107 Boechera stricta
Bostr.3288s0093 2.0kb upstream 2.0kb upstream 3783 true Scaffold3288: 458325-462107 Boechera stricta
Bostr.3288s0093 2.0kb upstream 2.0kb upstream 2000 false Scaffold3288: 458325-460324 Boechera stricta
Bostr.3288s0093 2.0kb downstream 2.0kb downstream 3783 true Scaffold3288: 460325-464107 Boechera stricta
Bostr.3288s0093 2.0kb downstream 2.0kb downstream 2000 false Scaffold3288: 462108-464107 Boechera stricta
Bostr.3288s0093 5.0kb upstream 5.0kb upstream 6783 true Scaffold3288: 455325-462107 Boechera stricta
Bostr.3288s0093 5.0kb upstream 5.0kb upstream 5000 false Scaffold3288: 455325-460324 Boechera stricta
Bostr.3288s0093 5.0kb downstream 5.0kb downstream 6783 true Scaffold3288: 460325-467107 Boechera stricta
Bostr.3288s0093 5.0kb downstream 5.0kb downstream 5000 false Scaffold3288: 462108-467107 Boechera stricta
Bostr.3288s0093 10.0kb upstream 10.0kb upstream 11783 true Scaffold3288: 450325-462107 Boechera stricta
Bostr.3288s0093 10.0kb upstream 10.0kb upstream 10000 false Scaffold3288: 450325-460324 Boechera stricta
Bostr.3288s0093 10.0kb downstream 10.0kb downstream 11783 true Scaffold3288: 460325-472107 Boechera stricta
Bostr.3288s0093 10.0kb downstream 10.0kb downstream 10000 false Scaffold3288: 462108-472107 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368864 5261 Brassicaceae View MSA
123831426 5264 Brassicales-Malvales View MSA
124345987 5266 SBM View MSA
124242880 5268 Malvidae View MSA
124070478 5270 Rosid View MSA
123742493 5271 Pentapetalae View MSA
122794040 5272 Eudicot View MSA
122041542 5273 Angiosperm View MSA
121345615 5274 Embryophyte View MSA
123424772 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain