Gene : Bostr.3359s0139 B. stricta v1.2

Defline:  (1 of 2) PTHR31062:SF16 - XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE PROTEIN 29-RELATED Genomic Order:  139
Name:  ? Bostr.3359s0139 Secondary Identifier:  ? PAC:30655152

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.3359s0139 0.5kb upstream 0.5kb upstream 3017 true Scaffold3359: 1416818-1419834 Boechera stricta
Bostr.3359s0139 0.5kb upstream 0.5kb upstream 500 false Scaffold3359: 1419335-1419834 Boechera stricta
Bostr.3359s0139 0.5kb downstream 0.5kb downstream 3017 true Scaffold3359: 1416318-1419334 Boechera stricta
Bostr.3359s0139 0.5kb downstream 0.5kb downstream 500 false Scaffold3359: 1416318-1416817 Boechera stricta
Bostr.3359s0139 1.0kb upstream 1.0kb upstream 3517 true Scaffold3359: 1416818-1420334 Boechera stricta
Bostr.3359s0139 1.0kb upstream 1.0kb upstream 1000 false Scaffold3359: 1419335-1420334 Boechera stricta
Bostr.3359s0139 1.0kb downstream 1.0kb downstream 3517 true Scaffold3359: 1415818-1419334 Boechera stricta
Bostr.3359s0139 1.0kb downstream 1.0kb downstream 1000 false Scaffold3359: 1415818-1416817 Boechera stricta
Bostr.3359s0139 2.0kb upstream 2.0kb upstream 4517 true Scaffold3359: 1416818-1421334 Boechera stricta
Bostr.3359s0139 2.0kb upstream 2.0kb upstream 2000 false Scaffold3359: 1419335-1421334 Boechera stricta
Bostr.3359s0139 2.0kb downstream 2.0kb downstream 4517 true Scaffold3359: 1414818-1419334 Boechera stricta
Bostr.3359s0139 2.0kb downstream 2.0kb downstream 2000 false Scaffold3359: 1414818-1416817 Boechera stricta
Bostr.3359s0139 5.0kb upstream 5.0kb upstream 7517 true Scaffold3359: 1416818-1424334 Boechera stricta
Bostr.3359s0139 5.0kb upstream 5.0kb upstream 5000 false Scaffold3359: 1419335-1424334 Boechera stricta
Bostr.3359s0139 5.0kb downstream 5.0kb downstream 7517 true Scaffold3359: 1411818-1419334 Boechera stricta
Bostr.3359s0139 5.0kb downstream 5.0kb downstream 5000 false Scaffold3359: 1411818-1416817 Boechera stricta
Bostr.3359s0139 10.0kb upstream 10.0kb upstream 12517 true Scaffold3359: 1416818-1429334 Boechera stricta
Bostr.3359s0139 10.0kb upstream 10.0kb upstream 10000 false Scaffold3359: 1419335-1429334 Boechera stricta
Bostr.3359s0139 10.0kb downstream 10.0kb downstream 12517 true Scaffold3359: 1406818-1419334 Boechera stricta
Bostr.3359s0139 10.0kb downstream 10.0kb downstream 10000 false Scaffold3359: 1406818-1416817 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122380766 5261 Brassicaceae View MSA
123834077 5264 Brassicales-Malvales View MSA
124346301 5266 SBM View MSA
124244671 5268 Malvidae View MSA
124067277 5270 Rosid View MSA
123745319 5271 Pentapetalae View MSA
122794660 5272 Eudicot View MSA
122049542 5273 Angiosperm View MSA
121347970 5274 Embryophyte View MSA
123380694 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain