Gene : Bostr.3359s0182 B. stricta v1.2

Defline:  (1 of 1) PTHR22780:SF13 - AP-4 COMPLEX SUBUNIT EPSILON-1 Genomic Order:  182
Name:  ? Bostr.3359s0182 Secondary Identifier:  ? PAC:30655161

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.3359s0182 0.5kb upstream 0.5kb upstream 5077 true Scaffold3359: 1862188-1867264 Boechera stricta
Bostr.3359s0182 0.5kb upstream 0.5kb upstream 500 false Scaffold3359: 1866765-1867264 Boechera stricta
Bostr.3359s0182 0.5kb downstream 0.5kb downstream 5077 true Scaffold3359: 1861688-1866764 Boechera stricta
Bostr.3359s0182 0.5kb downstream 0.5kb downstream 500 false Scaffold3359: 1861688-1862187 Boechera stricta
Bostr.3359s0182 1.0kb upstream 1.0kb upstream 5577 true Scaffold3359: 1862188-1867764 Boechera stricta
Bostr.3359s0182 1.0kb upstream 1.0kb upstream 1000 false Scaffold3359: 1866765-1867764 Boechera stricta
Bostr.3359s0182 1.0kb downstream 1.0kb downstream 5577 true Scaffold3359: 1861188-1866764 Boechera stricta
Bostr.3359s0182 1.0kb downstream 1.0kb downstream 1000 false Scaffold3359: 1861188-1862187 Boechera stricta
Bostr.3359s0182 2.0kb upstream 2.0kb upstream 6577 true Scaffold3359: 1862188-1868764 Boechera stricta
Bostr.3359s0182 2.0kb upstream 2.0kb upstream 2000 false Scaffold3359: 1866765-1868764 Boechera stricta
Bostr.3359s0182 2.0kb downstream 2.0kb downstream 6577 true Scaffold3359: 1860188-1866764 Boechera stricta
Bostr.3359s0182 2.0kb downstream 2.0kb downstream 2000 false Scaffold3359: 1860188-1862187 Boechera stricta
Bostr.3359s0182 5.0kb upstream 5.0kb upstream 9577 true Scaffold3359: 1862188-1871764 Boechera stricta
Bostr.3359s0182 5.0kb upstream 5.0kb upstream 5000 false Scaffold3359: 1866765-1871764 Boechera stricta
Bostr.3359s0182 5.0kb downstream 5.0kb downstream 9577 true Scaffold3359: 1857188-1866764 Boechera stricta
Bostr.3359s0182 5.0kb downstream 5.0kb downstream 5000 false Scaffold3359: 1857188-1862187 Boechera stricta
Bostr.3359s0182 10.0kb upstream 10.0kb upstream 14577 true Scaffold3359: 1862188-1876764 Boechera stricta
Bostr.3359s0182 10.0kb upstream 10.0kb upstream 10000 false Scaffold3359: 1866765-1876764 Boechera stricta
Bostr.3359s0182 10.0kb downstream 10.0kb downstream 14577 true Scaffold3359: 1852188-1866764 Boechera stricta
Bostr.3359s0182 10.0kb downstream 10.0kb downstream 10000 false Scaffold3359: 1852188-1862187 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122376158 5261 Brassicaceae View MSA
123830957 5264 Brassicales-Malvales View MSA
124339376 5266 SBM View MSA
124237282 5268 Malvidae View MSA
124067026 5270 Rosid View MSA
123751016 5271 Pentapetalae View MSA
122788074 5272 Eudicot View MSA
122045484 5273 Angiosperm View MSA
121344174 5274 Embryophyte View MSA
123427678 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain