Gene : Bostr.3640s0008 B. stricta v1.2

Defline:  (1 of 2) PTHR33334:SF2 - GENOMIC DNA, CHROMOSOME 3, P1 CLONE: MQC3 Genomic Order:  8
Name:  ? Bostr.3640s0008 Secondary Identifier:  ? PAC:30651921

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.3640s0008 0.5kb upstream 0.5kb upstream 2649 true Scaffold3640: 34535-37183 Boechera stricta
Bostr.3640s0008 0.5kb upstream 0.5kb upstream 500 false Scaffold3640: 34535-35034 Boechera stricta
Bostr.3640s0008 0.5kb downstream 0.5kb downstream 2649 true Scaffold3640: 35035-37683 Boechera stricta
Bostr.3640s0008 0.5kb downstream 0.5kb downstream 500 false Scaffold3640: 37184-37683 Boechera stricta
Bostr.3640s0008 1.0kb upstream 1.0kb upstream 3149 true Scaffold3640: 34035-37183 Boechera stricta
Bostr.3640s0008 1.0kb upstream 1.0kb upstream 1000 false Scaffold3640: 34035-35034 Boechera stricta
Bostr.3640s0008 1.0kb downstream 1.0kb downstream 3149 true Scaffold3640: 35035-38183 Boechera stricta
Bostr.3640s0008 1.0kb downstream 1.0kb downstream 1000 false Scaffold3640: 37184-38183 Boechera stricta
Bostr.3640s0008 2.0kb upstream 2.0kb upstream 4149 true Scaffold3640: 33035-37183 Boechera stricta
Bostr.3640s0008 2.0kb upstream 2.0kb upstream 2000 false Scaffold3640: 33035-35034 Boechera stricta
Bostr.3640s0008 2.0kb downstream 2.0kb downstream 4149 true Scaffold3640: 35035-39183 Boechera stricta
Bostr.3640s0008 2.0kb downstream 2.0kb downstream 2000 false Scaffold3640: 37184-39183 Boechera stricta
Bostr.3640s0008 5.0kb upstream 5.0kb upstream 7149 true Scaffold3640: 30035-37183 Boechera stricta
Bostr.3640s0008 5.0kb upstream 5.0kb upstream 5000 false Scaffold3640: 30035-35034 Boechera stricta
Bostr.3640s0008 5.0kb downstream 5.0kb downstream 7149 true Scaffold3640: 35035-42183 Boechera stricta
Bostr.3640s0008 5.0kb downstream 5.0kb downstream 5000 false Scaffold3640: 37184-42183 Boechera stricta
Bostr.3640s0008 10.0kb upstream 10.0kb upstream 12149 true Scaffold3640: 25035-37183 Boechera stricta
Bostr.3640s0008 10.0kb upstream 10.0kb upstream 10000 false Scaffold3640: 25035-35034 Boechera stricta
Bostr.3640s0008 10.0kb downstream 10.0kb downstream 12149 true Scaffold3640: 35035-47183 Boechera stricta
Bostr.3640s0008 10.0kb downstream 10.0kb downstream 10000 false Scaffold3640: 37184-47183 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367859 5261 Brassicaceae View MSA
123840813 5264 Brassicales-Malvales View MSA
124322787 5266 SBM View MSA
124248764 5268 Malvidae View MSA
124070153 5270 Rosid View MSA
123737898 5271 Pentapetalae View MSA
122796234 5272 Eudicot View MSA
122050625 5273 Angiosperm View MSA
121312034 5274 Embryophyte View MSA
123349247 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain