Gene : Bostr.4962s0001 B. stricta v1.2

Defline:  (1 of 1) PTHR32387:SF3 - ATP/DNA BINDING PROTEIN Genomic Order:  1
Name:  ? Bostr.4962s0001 Secondary Identifier:  ? PAC:30674421

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.4962s0001 0.5kb upstream 0.5kb upstream 6557 true Scaffold4962: 64-6620 Boechera stricta
Bostr.4962s0001 0.5kb upstream 0.5kb upstream 500 false Scaffold4962: 64-563 Boechera stricta
Bostr.4962s0001 0.5kb downstream 0.5kb downstream 6312 true Scaffold4962: 564-6875 Boechera stricta
Bostr.4962s0001 0.5kb downstream 0.5kb downstream 255 false Scaffold4962: 6621-6875 Boechera stricta
Bostr.4962s0001 1.0kb upstream 1.0kb upstream 6620 true Scaffold4962: 1-6620 Boechera stricta
Bostr.4962s0001 1.0kb upstream 1.0kb upstream 563 false Scaffold4962: 1-563 Boechera stricta
Bostr.4962s0001 1.0kb downstream 1.0kb downstream 6312 true Scaffold4962: 564-6875 Boechera stricta
Bostr.4962s0001 1.0kb downstream 1.0kb downstream 255 false Scaffold4962: 6621-6875 Boechera stricta
Bostr.4962s0001 2.0kb upstream 2.0kb upstream 6620 true Scaffold4962: 1-6620 Boechera stricta
Bostr.4962s0001 2.0kb upstream 2.0kb upstream 563 false Scaffold4962: 1-563 Boechera stricta
Bostr.4962s0001 2.0kb downstream 2.0kb downstream 6312 true Scaffold4962: 564-6875 Boechera stricta
Bostr.4962s0001 2.0kb downstream 2.0kb downstream 255 false Scaffold4962: 6621-6875 Boechera stricta
Bostr.4962s0001 5.0kb upstream 5.0kb upstream 6620 true Scaffold4962: 1-6620 Boechera stricta
Bostr.4962s0001 5.0kb upstream 5.0kb upstream 563 false Scaffold4962: 1-563 Boechera stricta
Bostr.4962s0001 5.0kb downstream 5.0kb downstream 6312 true Scaffold4962: 564-6875 Boechera stricta
Bostr.4962s0001 5.0kb downstream 5.0kb downstream 255 false Scaffold4962: 6621-6875 Boechera stricta
Bostr.4962s0001 10.0kb upstream 10.0kb upstream 6620 true Scaffold4962: 1-6620 Boechera stricta
Bostr.4962s0001 10.0kb upstream 10.0kb upstream 563 false Scaffold4962: 1-563 Boechera stricta
Bostr.4962s0001 10.0kb downstream 10.0kb downstream 6312 true Scaffold4962: 564-6875 Boechera stricta
Bostr.4962s0001 10.0kb downstream 10.0kb downstream 255 false Scaffold4962: 6621-6875 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122341981 5261 Brassicaceae Singleton cluster - no MSA
123782343 5264 Brassicales-Malvales Singleton cluster - no MSA
124350631 5266 SBM View MSA
124252588 5268 Malvidae View MSA
124072645 5270 Rosid View MSA
123743971 5271 Pentapetalae View MSA
122792746 5272 Eudicot View MSA
122050414 5273 Angiosperm View MSA
121347481 5274 Embryophyte View MSA
123380559 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain