Gene : Bostr.5022s0038 B. stricta v1.2

Defline:  (1 of 1) PTHR33471:SF5 - EXPRESSED PROTEIN Genomic Order:  38
Name:  ? Bostr.5022s0038 Secondary Identifier:  ? PAC:30666276

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.5022s0038 0.5kb upstream 0.5kb upstream 2725 true Scaffold5022: 304178-306902 Boechera stricta
Bostr.5022s0038 0.5kb upstream 0.5kb upstream 500 false Scaffold5022: 306403-306902 Boechera stricta
Bostr.5022s0038 0.5kb downstream 0.5kb downstream 2725 true Scaffold5022: 303678-306402 Boechera stricta
Bostr.5022s0038 0.5kb downstream 0.5kb downstream 500 false Scaffold5022: 303678-304177 Boechera stricta
Bostr.5022s0038 1.0kb upstream 1.0kb upstream 3225 true Scaffold5022: 304178-307402 Boechera stricta
Bostr.5022s0038 1.0kb upstream 1.0kb upstream 1000 false Scaffold5022: 306403-307402 Boechera stricta
Bostr.5022s0038 1.0kb downstream 1.0kb downstream 3225 true Scaffold5022: 303178-306402 Boechera stricta
Bostr.5022s0038 1.0kb downstream 1.0kb downstream 1000 false Scaffold5022: 303178-304177 Boechera stricta
Bostr.5022s0038 2.0kb upstream 2.0kb upstream 4225 true Scaffold5022: 304178-308402 Boechera stricta
Bostr.5022s0038 2.0kb upstream 2.0kb upstream 2000 false Scaffold5022: 306403-308402 Boechera stricta
Bostr.5022s0038 2.0kb downstream 2.0kb downstream 4225 true Scaffold5022: 302178-306402 Boechera stricta
Bostr.5022s0038 2.0kb downstream 2.0kb downstream 2000 false Scaffold5022: 302178-304177 Boechera stricta
Bostr.5022s0038 5.0kb upstream 5.0kb upstream 7225 true Scaffold5022: 304178-311402 Boechera stricta
Bostr.5022s0038 5.0kb upstream 5.0kb upstream 5000 false Scaffold5022: 306403-311402 Boechera stricta
Bostr.5022s0038 5.0kb downstream 5.0kb downstream 7225 true Scaffold5022: 299178-306402 Boechera stricta
Bostr.5022s0038 5.0kb downstream 5.0kb downstream 5000 false Scaffold5022: 299178-304177 Boechera stricta
Bostr.5022s0038 10.0kb upstream 10.0kb upstream 12225 true Scaffold5022: 304178-316402 Boechera stricta
Bostr.5022s0038 10.0kb upstream 10.0kb upstream 10000 false Scaffold5022: 306403-316402 Boechera stricta
Bostr.5022s0038 10.0kb downstream 10.0kb downstream 12225 true Scaffold5022: 294178-306402 Boechera stricta
Bostr.5022s0038 10.0kb downstream 10.0kb downstream 10000 false Scaffold5022: 294178-304177 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026537 5273 Angiosperm View MSA
122365709 5261 Brassicaceae View MSA
123828150 5264 Brassicales-Malvales View MSA
124337856 5266 SBM View MSA
124241290 5268 Malvidae View MSA
124062959 5270 Rosid View MSA
123740004 5271 Pentapetalae View MSA
122793582 5272 Eudicot View MSA
121345854 5274 Embryophyte View MSA
123426858 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain