Gene : Bostr.0556s0313 B. stricta v1.2
Defline:  (1 of 1) PTHR13370 - RNA METHYLASE-RELATED Genomic Order:  313
Name:  ? Bostr.0556s0313 Secondary Identifier:  ? PAC:30663723
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstricta PWY-6829 Boechera stricta pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.0556s0313 0.5kb upstream 0.5kb upstream 2774 true Scaffold556: 1884249-1887022 Boechera stricta
Bostr.0556s0313 0.5kb upstream 0.5kb upstream 500 false Scaffold556: 1886523-1887022 Boechera stricta
Bostr.0556s0313 0.5kb downstream 0.5kb downstream 2774 true Scaffold556: 1883749-1886522 Boechera stricta
Bostr.0556s0313 0.5kb downstream 0.5kb downstream 500 false Scaffold556: 1883749-1884248 Boechera stricta
Bostr.0556s0313 1.0kb upstream 1.0kb upstream 3274 true Scaffold556: 1884249-1887522 Boechera stricta
Bostr.0556s0313 1.0kb upstream 1.0kb upstream 1000 false Scaffold556: 1886523-1887522 Boechera stricta
Bostr.0556s0313 1.0kb downstream 1.0kb downstream 3274 true Scaffold556: 1883249-1886522 Boechera stricta
Bostr.0556s0313 1.0kb downstream 1.0kb downstream 1000 false Scaffold556: 1883249-1884248 Boechera stricta
Bostr.0556s0313 2.0kb upstream 2.0kb upstream 4274 true Scaffold556: 1884249-1888522 Boechera stricta
Bostr.0556s0313 2.0kb upstream 2.0kb upstream 2000 false Scaffold556: 1886523-1888522 Boechera stricta
Bostr.0556s0313 2.0kb downstream 2.0kb downstream 4274 true Scaffold556: 1882249-1886522 Boechera stricta
Bostr.0556s0313 2.0kb downstream 2.0kb downstream 2000 false Scaffold556: 1882249-1884248 Boechera stricta
Bostr.0556s0313 5.0kb upstream 5.0kb upstream 7274 true Scaffold556: 1884249-1891522 Boechera stricta
Bostr.0556s0313 5.0kb upstream 5.0kb upstream 5000 false Scaffold556: 1886523-1891522 Boechera stricta
Bostr.0556s0313 5.0kb downstream 5.0kb downstream 7274 true Scaffold556: 1879249-1886522 Boechera stricta
Bostr.0556s0313 5.0kb downstream 5.0kb downstream 5000 false Scaffold556: 1879249-1884248 Boechera stricta
Bostr.0556s0313 10.0kb upstream 10.0kb upstream 12274 true Scaffold556: 1884249-1896522 Boechera stricta
Bostr.0556s0313 10.0kb upstream 10.0kb upstream 10000 false Scaffold556: 1886523-1896522 Boechera stricta
Bostr.0556s0313 10.0kb downstream 10.0kb downstream 12274 true Scaffold556: 1874249-1886522 Boechera stricta
Bostr.0556s0313 10.0kb downstream 10.0kb downstream 10000 false Scaffold556: 1874249-1884248 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366323 5261 Brassicaceae View MSA
123829804 5264 Brassicales-Malvales View MSA
124342748 5266 SBM View MSA
124252860 5268 Malvidae View MSA
124065317 5270 Rosid View MSA
123738561 5271 Pentapetalae View MSA
122788498 5272 Eudicot View MSA
122048014 5273 Angiosperm View MSA
121347099 5274 Embryophyte View MSA
123424311 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain