Gene : Bostr.0568s0158 B. stricta v1.2
Defline:  (1 of 2) PTHR23315:SF119 - U-BOX DOMAIN-CONTAINING PROTEIN 3 Genomic Order:  158
Name:  ? Bostr.0568s0158 Secondary Identifier:  ? PAC:30669596
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstricta PWY-7511 Boechera stricta pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.0568s0158 0.5kb upstream 0.5kb upstream 3044 true Scaffold568: 724165-727208 Boechera stricta
Bostr.0568s0158 0.5kb upstream 0.5kb upstream 500 false Scaffold568: 724165-724664 Boechera stricta
Bostr.0568s0158 0.5kb downstream 0.5kb downstream 3044 true Scaffold568: 724665-727708 Boechera stricta
Bostr.0568s0158 0.5kb downstream 0.5kb downstream 500 false Scaffold568: 727209-727708 Boechera stricta
Bostr.0568s0158 1.0kb upstream 1.0kb upstream 3544 true Scaffold568: 723665-727208 Boechera stricta
Bostr.0568s0158 1.0kb upstream 1.0kb upstream 1000 false Scaffold568: 723665-724664 Boechera stricta
Bostr.0568s0158 1.0kb downstream 1.0kb downstream 3544 true Scaffold568: 724665-728208 Boechera stricta
Bostr.0568s0158 1.0kb downstream 1.0kb downstream 1000 false Scaffold568: 727209-728208 Boechera stricta
Bostr.0568s0158 2.0kb upstream 2.0kb upstream 4544 true Scaffold568: 722665-727208 Boechera stricta
Bostr.0568s0158 2.0kb upstream 2.0kb upstream 2000 false Scaffold568: 722665-724664 Boechera stricta
Bostr.0568s0158 2.0kb downstream 2.0kb downstream 4544 true Scaffold568: 724665-729208 Boechera stricta
Bostr.0568s0158 2.0kb downstream 2.0kb downstream 2000 false Scaffold568: 727209-729208 Boechera stricta
Bostr.0568s0158 5.0kb upstream 5.0kb upstream 7544 true Scaffold568: 719665-727208 Boechera stricta
Bostr.0568s0158 5.0kb upstream 5.0kb upstream 5000 false Scaffold568: 719665-724664 Boechera stricta
Bostr.0568s0158 5.0kb downstream 5.0kb downstream 7544 true Scaffold568: 724665-732208 Boechera stricta
Bostr.0568s0158 5.0kb downstream 5.0kb downstream 5000 false Scaffold568: 727209-732208 Boechera stricta
Bostr.0568s0158 10.0kb upstream 10.0kb upstream 12544 true Scaffold568: 714665-727208 Boechera stricta
Bostr.0568s0158 10.0kb upstream 10.0kb upstream 10000 false Scaffold568: 714665-724664 Boechera stricta
Bostr.0568s0158 10.0kb downstream 10.0kb downstream 12544 true Scaffold568: 724665-737208 Boechera stricta
Bostr.0568s0158 10.0kb downstream 10.0kb downstream 10000 false Scaffold568: 727209-737208 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365114 5261 Brassicaceae View MSA
123798893 5264 Brassicales-Malvales View MSA
124296469 5266 SBM View MSA
124250310 5268 Malvidae View MSA
124067773 5270 Rosid View MSA
123748124 5271 Pentapetalae View MSA
122789337 5272 Eudicot View MSA
122048814 5273 Angiosperm View MSA
121345933 5274 Embryophyte View MSA
123428864 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain