Gene : Bostr.1040s0004 B. stricta v1.2
Defline:  (1 of 1) PTHR13112 - UPF3 REGULATOR OF NONSENSE TRANSCRIPTS-LIKE PROTEIN Genomic Order:  4
Name:  ? Bostr.1040s0004 Secondary Identifier:  ? PAC:30655039
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.1040s0004 0.5kb upstream 0.5kb upstream 4103 true Scaffold1040: 62174-66276 Boechera stricta
Bostr.1040s0004 0.5kb upstream 0.5kb upstream 500 false Scaffold1040: 62174-62673 Boechera stricta
Bostr.1040s0004 0.5kb downstream 0.5kb downstream 4103 true Scaffold1040: 62674-66776 Boechera stricta
Bostr.1040s0004 0.5kb downstream 0.5kb downstream 500 false Scaffold1040: 66277-66776 Boechera stricta
Bostr.1040s0004 1.0kb upstream 1.0kb upstream 4603 true Scaffold1040: 61674-66276 Boechera stricta
Bostr.1040s0004 1.0kb upstream 1.0kb upstream 1000 false Scaffold1040: 61674-62673 Boechera stricta
Bostr.1040s0004 1.0kb downstream 1.0kb downstream 4603 true Scaffold1040: 62674-67276 Boechera stricta
Bostr.1040s0004 1.0kb downstream 1.0kb downstream 1000 false Scaffold1040: 66277-67276 Boechera stricta
Bostr.1040s0004 2.0kb upstream 2.0kb upstream 5603 true Scaffold1040: 60674-66276 Boechera stricta
Bostr.1040s0004 2.0kb upstream 2.0kb upstream 2000 false Scaffold1040: 60674-62673 Boechera stricta
Bostr.1040s0004 2.0kb downstream 2.0kb downstream 5603 true Scaffold1040: 62674-68276 Boechera stricta
Bostr.1040s0004 2.0kb downstream 2.0kb downstream 2000 false Scaffold1040: 66277-68276 Boechera stricta
Bostr.1040s0004 5.0kb upstream 5.0kb upstream 8603 true Scaffold1040: 57674-66276 Boechera stricta
Bostr.1040s0004 5.0kb upstream 5.0kb upstream 5000 false Scaffold1040: 57674-62673 Boechera stricta
Bostr.1040s0004 5.0kb downstream 5.0kb downstream 8603 true Scaffold1040: 62674-71276 Boechera stricta
Bostr.1040s0004 5.0kb downstream 5.0kb downstream 5000 false Scaffold1040: 66277-71276 Boechera stricta
Bostr.1040s0004 10.0kb upstream 10.0kb upstream 13603 true Scaffold1040: 52674-66276 Boechera stricta
Bostr.1040s0004 10.0kb upstream 10.0kb upstream 10000 false Scaffold1040: 52674-62673 Boechera stricta
Bostr.1040s0004 10.0kb downstream 10.0kb downstream 13603 true Scaffold1040: 62674-76276 Boechera stricta
Bostr.1040s0004 10.0kb downstream 10.0kb downstream 10000 false Scaffold1040: 66277-76276 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041498 5273 Angiosperm View MSA
122379729 5261 Brassicaceae View MSA
123832807 5264 Brassicales-Malvales View MSA
124338059 5266 SBM View MSA
124249674 5268 Malvidae View MSA
124070961 5270 Rosid View MSA
123750498 5271 Pentapetalae View MSA
122788511 5272 Eudicot View MSA
121351189 5274 Embryophyte View MSA
123425600 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain