Protein Family : Smg-4/UPF3 family protein 124338059

Method ID:  5266 Method Name:  SBM
Sequence Alignment:  View MSA Member Count:  13

13 Genes

Primary Identifier Defline Organism Name Symbol Length Chromosome Location
orange1.1g009733m.g (1 of 1) PTHR13112//PTHR13112:SF3 - UPF3 REGULATOR OF NONSENSE TRANSCRIPTS-LIKE PROTEIN C. sinensis v1.1 6620   scaffold00363: 98421-105040
AT1G33980 (1 of 1) K14328 - regulator of nonsense transcripts 3 (UPF3, RENT3) A. thaliana TAIR10 UPF3 3431   Chr1: 12351593-12355023
Thhalv10007455m.g (1 of 1) PTHR13112 - UPF3 REGULATOR OF NONSENSE TRANSCRIPTS-LIKE PROTEIN E. salsugineum v1.0 3838   scaffold_5: 1136822-1140659
Ciclev10019695m.g (1 of 4) PTHR13112//PTHR13112:SF3 - UPF3 REGULATOR OF NONSENSE TRANSCRIPTS-LIKE PROTEIN C. clementina v1.0 7122   scaffold_3: 19310540-19317661
Gorai.010G229700 (1 of 2) PTHR13112//PTHR13112:SF3 - UPF3 REGULATOR OF NONSENSE TRANSCRIPTS-LIKE PROTEIN G. raimondii v2.1 5794   Chr10: 60134003-60139796
Thecc1EG028841 (1 of 1) PTHR13112//PTHR13112:SF3 - UPF3 REGULATOR OF NONSENSE TRANSCRIPTS-LIKE PROTEIN // SUBFAMILY NOT NAMED T. cacao v1.1 13490   scaffold_6: 18791650-18805139
Araha.25545s0002 (1 of 1) PTHR13112 - UPF3 REGULATOR OF NONSENSE TRANSCRIPTS-LIKE PROTEIN A. halleri v1.1 2823   Scaffold25545: 1490-4312
Cagra.6333s0004 (1 of 1) PTHR13112 - UPF3 REGULATOR OF NONSENSE TRANSCRIPTS-LIKE PROTEIN C. grandiflora v1.1 3515   Scaffold6333: 17986-21500
Brara.E01837 (1 of 3) PTHR13112 - UPF3 REGULATOR OF NONSENSE TRANSCRIPTS-LIKE PROTEIN B. rapa FPsc v1.3 3026   A05: 14837732-14840757
Brara.C00968 (1 of 3) PTHR13112 - UPF3 REGULATOR OF NONSENSE TRANSCRIPTS-LIKE PROTEIN B. rapa FPsc v1.3 3258   A03: 4549343-4552600
Bostr.1040s0004 (1 of 1) PTHR13112 - UPF3 REGULATOR OF NONSENSE TRANSCRIPTS-LIKE PROTEIN B. stricta v1.2 3603   Scaffold1040: 62674-66276
AL1G48420 (1 of 1) K14328 - regulator of nonsense transcripts 3 (UPF3, RENT3) A. lyrata v2.1 3927   scaffold_1: 15846122-15850048
Carub.0001s3206 (1 of 1) K14328 - regulator of nonsense transcripts 3 (UPF3, RENT3) C. rubella v1.1 3519   scaffold_1: 11931558-11935076

13 Members

Protein Name Organism Name Cluster ID Cluster Name Same Organism Count Method ID Method Name
Thhalv10007455m E. salsugineum v1.0 124338059 Smg-4/UPF3 family protein 1 5266 SBM
Ciclev10019695m C. clementina v1.0 124338059 Smg-4/UPF3 family protein 1 5266 SBM
Thecc1EG028841t3 T. cacao v1.1 124338059 Smg-4/UPF3 family protein 1 5266 SBM
Bostr.1040s0004.1.p B. stricta v1.2 124338059 Smg-4/UPF3 family protein 1 5266 SBM
orange1.1g009733m C. sinensis v1.1 124338059 Smg-4/UPF3 family protein 1 5266 SBM
AT1G33980.2 A. thaliana TAIR10 124338059 Smg-4/UPF3 family protein 1 5266 SBM
Gorai.010G229700.1 G. raimondii v2.1 124338059 Smg-4/UPF3 family protein 1 5266 SBM
Araha.25545s0002.1.p A. halleri v1.1 124338059 Smg-4/UPF3 family protein 1 5266 SBM
Cagra.6333s0004.1.p C. grandiflora v1.1 124338059 Smg-4/UPF3 family protein 1 5266 SBM
Brara.C00968.1.p B. rapa FPsc v1.3 124338059 Smg-4/UPF3 family protein 2 5266 SBM
Brara.E01837.1.p B. rapa FPsc v1.3 124338059 Smg-4/UPF3 family protein 2 5266 SBM
AL1G48420.t1 A. lyrata v2.1 124338059 Smg-4/UPF3 family protein 1 5266 SBM
Carub.0001s3206.1.p C. rubella v1.1 124338059 Smg-4/UPF3 family protein 1 5266 SBM