Gene : Thhalv10007455m.g E. salsugineum v1.0
Defline:  (1 of 1) PTHR13112 - UPF3 REGULATOR OF NONSENSE TRANSCRIPTS-LIKE PROTEIN Genomic Order:  73
Name:  ? Thhalv10007455m.g Secondary Identifier:  ? PAC:20186896
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10007455m.g 0.5kb upstream 0.5kb upstream 4338 true scaffold_5: 1136822-1141159 Eutrema salsugineum
Thhalv10007455m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 1140660-1141159 Eutrema salsugineum
Thhalv10007455m.g 0.5kb downstream 0.5kb downstream 4338 true scaffold_5: 1136322-1140659 Eutrema salsugineum
Thhalv10007455m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 1136322-1136821 Eutrema salsugineum
Thhalv10007455m.g 1.0kb upstream 1.0kb upstream 4838 true scaffold_5: 1136822-1141659 Eutrema salsugineum
Thhalv10007455m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 1140660-1141659 Eutrema salsugineum
Thhalv10007455m.g 1.0kb downstream 1.0kb downstream 4838 true scaffold_5: 1135822-1140659 Eutrema salsugineum
Thhalv10007455m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 1135822-1136821 Eutrema salsugineum
Thhalv10007455m.g 2.0kb upstream 2.0kb upstream 5838 true scaffold_5: 1136822-1142659 Eutrema salsugineum
Thhalv10007455m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 1140660-1142659 Eutrema salsugineum
Thhalv10007455m.g 2.0kb downstream 2.0kb downstream 5838 true scaffold_5: 1134822-1140659 Eutrema salsugineum
Thhalv10007455m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 1134822-1136821 Eutrema salsugineum
Thhalv10007455m.g 5.0kb upstream 5.0kb upstream 8838 true scaffold_5: 1136822-1145659 Eutrema salsugineum
Thhalv10007455m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 1140660-1145659 Eutrema salsugineum
Thhalv10007455m.g 5.0kb downstream 5.0kb downstream 8838 true scaffold_5: 1131822-1140659 Eutrema salsugineum
Thhalv10007455m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 1131822-1136821 Eutrema salsugineum
Thhalv10007455m.g 10.0kb upstream 10.0kb upstream 13838 true scaffold_5: 1136822-1150659 Eutrema salsugineum
Thhalv10007455m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 1140660-1150659 Eutrema salsugineum
Thhalv10007455m.g 10.0kb downstream 10.0kb downstream 13838 true scaffold_5: 1126822-1140659 Eutrema salsugineum
Thhalv10007455m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 1126822-1136821 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041498 5273 Angiosperm View MSA
122379729 5261 Brassicaceae View MSA
123832807 5264 Brassicales-Malvales View MSA
124338059 5266 SBM View MSA
124249674 5268 Malvidae View MSA
124070961 5270 Rosid View MSA
123750498 5271 Pentapetalae View MSA
122788511 5272 Eudicot View MSA
121351189 5274 Embryophyte View MSA
123425600 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain