Gene : Carub.0001s3206 C. rubella v1.1
Defline:  (1 of 1) K14328 - regulator of nonsense transcripts 3 (UPF3, RENT3) Genomic Order:  3206
Name:  ? Carub.0001s3206 Secondary Identifier:  ? PAC:39228730
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Ontology Annotation Displayer

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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0001s3206 0.5kb upstream 0.5kb upstream 4019 true scaffold_1: 11931058-11935076 Capsella rubella
Carub.0001s3206 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 11931058-11931557 Capsella rubella
Carub.0001s3206 0.5kb downstream 0.5kb downstream 4019 true scaffold_1: 11931558-11935576 Capsella rubella
Carub.0001s3206 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 11935077-11935576 Capsella rubella
Carub.0001s3206 1.0kb upstream 1.0kb upstream 4519 true scaffold_1: 11930558-11935076 Capsella rubella
Carub.0001s3206 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 11930558-11931557 Capsella rubella
Carub.0001s3206 1.0kb downstream 1.0kb downstream 4519 true scaffold_1: 11931558-11936076 Capsella rubella
Carub.0001s3206 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 11935077-11936076 Capsella rubella
Carub.0001s3206 2.0kb upstream 2.0kb upstream 5519 true scaffold_1: 11929558-11935076 Capsella rubella
Carub.0001s3206 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 11929558-11931557 Capsella rubella
Carub.0001s3206 2.0kb downstream 2.0kb downstream 5519 true scaffold_1: 11931558-11937076 Capsella rubella
Carub.0001s3206 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 11935077-11937076 Capsella rubella
Carub.0001s3206 5.0kb upstream 5.0kb upstream 8519 true scaffold_1: 11926558-11935076 Capsella rubella
Carub.0001s3206 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 11926558-11931557 Capsella rubella
Carub.0001s3206 5.0kb downstream 5.0kb downstream 8519 true scaffold_1: 11931558-11940076 Capsella rubella
Carub.0001s3206 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 11935077-11940076 Capsella rubella
Carub.0001s3206 10.0kb upstream 10.0kb upstream 13519 true scaffold_1: 11921558-11935076 Capsella rubella
Carub.0001s3206 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 11921558-11931557 Capsella rubella
Carub.0001s3206 10.0kb downstream 10.0kb downstream 13519 true scaffold_1: 11931558-11945076 Capsella rubella
Carub.0001s3206 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 11935077-11945076 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041498 5273 Angiosperm View MSA
122379729 5261 Brassicaceae View MSA
123832807 5264 Brassicales-Malvales View MSA
124338059 5266 SBM View MSA
124249674 5268 Malvidae View MSA
124070961 5270 Rosid View MSA
123750498 5271 Pentapetalae View MSA
122788511 5272 Eudicot View MSA
121351189 5274 Embryophyte View MSA
123425600 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain