Gene : Brara.C00968 B. rapa FPsc v1.3
Defline:  (1 of 3) PTHR13112 - UPF3 REGULATOR OF NONSENSE TRANSCRIPTS-LIKE PROTEIN Genomic Order:  968
Name:  ? Brara.C00968 Secondary Identifier:  ? PAC:30618618
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.C00968 0.5kb upstream 0.5kb upstream 3758 true A03: 4549343-4553100 Brassica rapa FPsc
Brara.C00968 0.5kb upstream 0.5kb upstream 500 false A03: 4552601-4553100 Brassica rapa FPsc
Brara.C00968 0.5kb downstream 0.5kb downstream 3758 true A03: 4548843-4552600 Brassica rapa FPsc
Brara.C00968 0.5kb downstream 0.5kb downstream 500 false A03: 4548843-4549342 Brassica rapa FPsc
Brara.C00968 1.0kb upstream 1.0kb upstream 4258 true A03: 4549343-4553600 Brassica rapa FPsc
Brara.C00968 1.0kb upstream 1.0kb upstream 1000 false A03: 4552601-4553600 Brassica rapa FPsc
Brara.C00968 1.0kb downstream 1.0kb downstream 4258 true A03: 4548343-4552600 Brassica rapa FPsc
Brara.C00968 1.0kb downstream 1.0kb downstream 1000 false A03: 4548343-4549342 Brassica rapa FPsc
Brara.C00968 2.0kb upstream 2.0kb upstream 5258 true A03: 4549343-4554600 Brassica rapa FPsc
Brara.C00968 2.0kb upstream 2.0kb upstream 2000 false A03: 4552601-4554600 Brassica rapa FPsc
Brara.C00968 2.0kb downstream 2.0kb downstream 5258 true A03: 4547343-4552600 Brassica rapa FPsc
Brara.C00968 2.0kb downstream 2.0kb downstream 2000 false A03: 4547343-4549342 Brassica rapa FPsc
Brara.C00968 5.0kb upstream 5.0kb upstream 8258 true A03: 4549343-4557600 Brassica rapa FPsc
Brara.C00968 5.0kb upstream 5.0kb upstream 5000 false A03: 4552601-4557600 Brassica rapa FPsc
Brara.C00968 5.0kb downstream 5.0kb downstream 8258 true A03: 4544343-4552600 Brassica rapa FPsc
Brara.C00968 5.0kb downstream 5.0kb downstream 5000 false A03: 4544343-4549342 Brassica rapa FPsc
Brara.C00968 10.0kb upstream 10.0kb upstream 13258 true A03: 4549343-4562600 Brassica rapa FPsc
Brara.C00968 10.0kb upstream 10.0kb upstream 10000 false A03: 4552601-4562600 Brassica rapa FPsc
Brara.C00968 10.0kb downstream 10.0kb downstream 13258 true A03: 4539343-4552600 Brassica rapa FPsc
Brara.C00968 10.0kb downstream 10.0kb downstream 10000 false A03: 4539343-4549342 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041498 5273 Angiosperm View MSA
122379729 5261 Brassicaceae View MSA
123832807 5264 Brassicales-Malvales View MSA
124338059 5266 SBM View MSA
124249674 5268 Malvidae View MSA
124070961 5270 Rosid View MSA
123750498 5271 Pentapetalae View MSA
122788511 5272 Eudicot View MSA
121351189 5274 Embryophyte View MSA
123425600 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier