Gene : Bostr.2570s0200 B. stricta v1.2
Defline:  (1 of 3) 4.4.1.9 - L-3-cyanoalanine synthase / Beta-cyanoalanine synthase Genomic Order:  200
Name:  ? Bostr.2570s0200 Secondary Identifier:  ? PAC:30666711
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstricta ASPSYNII-PWY Boechera stricta pathologic  
Bstricta CYSTSYN-PWY Boechera stricta pathologic  
Bstricta P401-PWY Boechera stricta pathologic  
Bstricta PWY-6936 Boechera stricta pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

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Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.2570s0200 0.5kb upstream 0.5kb upstream 3055 true Scaffold2570: 1010640-1013694 Boechera stricta
Bostr.2570s0200 0.5kb upstream 0.5kb upstream 500 false Scaffold2570: 1013195-1013694 Boechera stricta
Bostr.2570s0200 0.5kb downstream 0.5kb downstream 3055 true Scaffold2570: 1010140-1013194 Boechera stricta
Bostr.2570s0200 0.5kb downstream 0.5kb downstream 500 false Scaffold2570: 1010140-1010639 Boechera stricta
Bostr.2570s0200 1.0kb upstream 1.0kb upstream 3555 true Scaffold2570: 1010640-1014194 Boechera stricta
Bostr.2570s0200 1.0kb upstream 1.0kb upstream 1000 false Scaffold2570: 1013195-1014194 Boechera stricta
Bostr.2570s0200 1.0kb downstream 1.0kb downstream 3555 true Scaffold2570: 1009640-1013194 Boechera stricta
Bostr.2570s0200 1.0kb downstream 1.0kb downstream 1000 false Scaffold2570: 1009640-1010639 Boechera stricta
Bostr.2570s0200 2.0kb upstream 2.0kb upstream 4555 true Scaffold2570: 1010640-1015194 Boechera stricta
Bostr.2570s0200 2.0kb upstream 2.0kb upstream 2000 false Scaffold2570: 1013195-1015194 Boechera stricta
Bostr.2570s0200 2.0kb downstream 2.0kb downstream 4555 true Scaffold2570: 1008640-1013194 Boechera stricta
Bostr.2570s0200 2.0kb downstream 2.0kb downstream 2000 false Scaffold2570: 1008640-1010639 Boechera stricta
Bostr.2570s0200 5.0kb upstream 5.0kb upstream 7555 true Scaffold2570: 1010640-1018194 Boechera stricta
Bostr.2570s0200 5.0kb upstream 5.0kb upstream 5000 false Scaffold2570: 1013195-1018194 Boechera stricta
Bostr.2570s0200 5.0kb downstream 5.0kb downstream 7555 true Scaffold2570: 1005640-1013194 Boechera stricta
Bostr.2570s0200 5.0kb downstream 5.0kb downstream 5000 false Scaffold2570: 1005640-1010639 Boechera stricta
Bostr.2570s0200 10.0kb upstream 10.0kb upstream 12555 true Scaffold2570: 1010640-1023194 Boechera stricta
Bostr.2570s0200 10.0kb upstream 10.0kb upstream 10000 false Scaffold2570: 1013195-1023194 Boechera stricta
Bostr.2570s0200 10.0kb downstream 10.0kb downstream 12555 true Scaffold2570: 1000640-1013194 Boechera stricta
Bostr.2570s0200 10.0kb downstream 10.0kb downstream 10000 false Scaffold2570: 1000640-1010639 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122360333 5261 Brassicaceae View MSA
123832468 5264 Brassicales-Malvales View MSA
124351332 5266 SBM View MSA
124251516 5268 Malvidae View MSA
124069374 5270 Rosid View MSA
123750353 5271 Pentapetalae View MSA
122787082 5272 Eudicot View MSA
122044204 5273 Angiosperm View MSA
121350970 5274 Embryophyte View MSA
123424805 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain