Gene : Bostr.1460s0180 B. stricta v1.2
Defline:  (1 of 2) PTHR31155:SF4 - ACYL-[ACYL-CARRIER-PROTEIN] DESATURASE 1, CHLOROPLASTIC-RELATED Genomic Order:  180
Name:  ? Bostr.1460s0180 Secondary Identifier:  ? PAC:30654557
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstricta PWY-5147 Boechera stricta pathologic  
Bstricta PWY-5156 Boechera stricta pathologic  
Bstricta PWY-5366 Boechera stricta pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.1460s0180 0.5kb upstream 0.5kb upstream 3357 true Scaffold1460: 718184-721540 Boechera stricta
Bostr.1460s0180 0.5kb upstream 0.5kb upstream 500 false Scaffold1460: 718184-718683 Boechera stricta
Bostr.1460s0180 0.5kb downstream 0.5kb downstream 3357 true Scaffold1460: 718684-722040 Boechera stricta
Bostr.1460s0180 0.5kb downstream 0.5kb downstream 500 false Scaffold1460: 721541-722040 Boechera stricta
Bostr.1460s0180 1.0kb upstream 1.0kb upstream 3857 true Scaffold1460: 717684-721540 Boechera stricta
Bostr.1460s0180 1.0kb upstream 1.0kb upstream 1000 false Scaffold1460: 717684-718683 Boechera stricta
Bostr.1460s0180 1.0kb downstream 1.0kb downstream 3857 true Scaffold1460: 718684-722540 Boechera stricta
Bostr.1460s0180 1.0kb downstream 1.0kb downstream 1000 false Scaffold1460: 721541-722540 Boechera stricta
Bostr.1460s0180 2.0kb upstream 2.0kb upstream 4857 true Scaffold1460: 716684-721540 Boechera stricta
Bostr.1460s0180 2.0kb upstream 2.0kb upstream 2000 false Scaffold1460: 716684-718683 Boechera stricta
Bostr.1460s0180 2.0kb downstream 2.0kb downstream 4857 true Scaffold1460: 718684-723540 Boechera stricta
Bostr.1460s0180 2.0kb downstream 2.0kb downstream 2000 false Scaffold1460: 721541-723540 Boechera stricta
Bostr.1460s0180 5.0kb upstream 5.0kb upstream 7857 true Scaffold1460: 713684-721540 Boechera stricta
Bostr.1460s0180 5.0kb upstream 5.0kb upstream 5000 false Scaffold1460: 713684-718683 Boechera stricta
Bostr.1460s0180 5.0kb downstream 5.0kb downstream 7857 true Scaffold1460: 718684-726540 Boechera stricta
Bostr.1460s0180 5.0kb downstream 5.0kb downstream 5000 false Scaffold1460: 721541-726540 Boechera stricta
Bostr.1460s0180 10.0kb upstream 10.0kb upstream 12857 true Scaffold1460: 708684-721540 Boechera stricta
Bostr.1460s0180 10.0kb upstream 10.0kb upstream 10000 false Scaffold1460: 708684-718683 Boechera stricta
Bostr.1460s0180 10.0kb downstream 10.0kb downstream 12857 true Scaffold1460: 718684-731540 Boechera stricta
Bostr.1460s0180 10.0kb downstream 10.0kb downstream 10000 false Scaffold1460: 721541-731540 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362645 5261 Brassicaceae View MSA
123829168 5264 Brassicales-Malvales View MSA
124350159 5266 SBM View MSA
124243967 5268 Malvidae View MSA
124069229 5270 Rosid View MSA
123745832 5271 Pentapetalae View MSA
122789548 5272 Eudicot View MSA
122047247 5273 Angiosperm View MSA
121347152 5274 Embryophyte View MSA
123428838 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain