Gene : Bostr.6251s0089 B. stricta v1.2
Defline:  (1 of 62) PF02458 - Transferase family (Transferase) Genomic Order:  89
Name:  ? Bostr.6251s0089 Secondary Identifier:  ? PAC:30665571
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstricta PWY-361 Boechera stricta pathologic  
Bstricta PWY-6039 Boechera stricta pathologic  
Bstricta PWY-6040 Boechera stricta pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.6251s0089 0.5kb upstream 0.5kb upstream 2491 true Scaffold6251: 431669-434159 Boechera stricta
Bostr.6251s0089 0.5kb upstream 0.5kb upstream 500 false Scaffold6251: 431669-432168 Boechera stricta
Bostr.6251s0089 0.5kb downstream 0.5kb downstream 2491 true Scaffold6251: 432169-434659 Boechera stricta
Bostr.6251s0089 0.5kb downstream 0.5kb downstream 500 false Scaffold6251: 434160-434659 Boechera stricta
Bostr.6251s0089 1.0kb upstream 1.0kb upstream 2991 true Scaffold6251: 431169-434159 Boechera stricta
Bostr.6251s0089 1.0kb upstream 1.0kb upstream 1000 false Scaffold6251: 431169-432168 Boechera stricta
Bostr.6251s0089 1.0kb downstream 1.0kb downstream 2991 true Scaffold6251: 432169-435159 Boechera stricta
Bostr.6251s0089 1.0kb downstream 1.0kb downstream 1000 false Scaffold6251: 434160-435159 Boechera stricta
Bostr.6251s0089 2.0kb upstream 2.0kb upstream 3991 true Scaffold6251: 430169-434159 Boechera stricta
Bostr.6251s0089 2.0kb upstream 2.0kb upstream 2000 false Scaffold6251: 430169-432168 Boechera stricta
Bostr.6251s0089 2.0kb downstream 2.0kb downstream 3991 true Scaffold6251: 432169-436159 Boechera stricta
Bostr.6251s0089 2.0kb downstream 2.0kb downstream 2000 false Scaffold6251: 434160-436159 Boechera stricta
Bostr.6251s0089 5.0kb upstream 5.0kb upstream 6991 true Scaffold6251: 427169-434159 Boechera stricta
Bostr.6251s0089 5.0kb upstream 5.0kb upstream 5000 false Scaffold6251: 427169-432168 Boechera stricta
Bostr.6251s0089 5.0kb downstream 5.0kb downstream 6991 true Scaffold6251: 432169-439159 Boechera stricta
Bostr.6251s0089 5.0kb downstream 5.0kb downstream 5000 false Scaffold6251: 434160-439159 Boechera stricta
Bostr.6251s0089 10.0kb upstream 10.0kb upstream 11991 true Scaffold6251: 422169-434159 Boechera stricta
Bostr.6251s0089 10.0kb upstream 10.0kb upstream 10000 false Scaffold6251: 422169-432168 Boechera stricta
Bostr.6251s0089 10.0kb downstream 10.0kb downstream 11991 true Scaffold6251: 432169-444159 Boechera stricta
Bostr.6251s0089 10.0kb downstream 10.0kb downstream 10000 false Scaffold6251: 434160-444159 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362832 5261 Brassicaceae View MSA
123830100 5264 Brassicales-Malvales View MSA
124345932 5266 SBM View MSA
124241469 5268 Malvidae View MSA
124064674 5270 Rosid View MSA
123740627 5271 Pentapetalae View MSA
122795284 5272 Eudicot View MSA
122051643 5273 Angiosperm View MSA
121350983 5274 Embryophyte View MSA
123428782 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain