Gene : Bostr.6251s0092 B. stricta v1.2
Defline:  (1 of 1) PTHR10920:SF12 - TRNA (CYTIDINE(32)/GUANOSINE(34)-2'-O)-METHYLTRANSFERASE-RELATED Genomic Order:  92
Name:  ? Bostr.6251s0092 Secondary Identifier:  ? PAC:30665565
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstricta PWY-6829 Boechera stricta pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.6251s0092 0.5kb upstream 0.5kb upstream 6841 true Scaffold6251: 443253-450093 Boechera stricta
Bostr.6251s0092 0.5kb upstream 0.5kb upstream 500 false Scaffold6251: 449594-450093 Boechera stricta
Bostr.6251s0092 0.5kb downstream 0.5kb downstream 6841 true Scaffold6251: 442753-449593 Boechera stricta
Bostr.6251s0092 0.5kb downstream 0.5kb downstream 500 false Scaffold6251: 442753-443252 Boechera stricta
Bostr.6251s0092 1.0kb upstream 1.0kb upstream 7341 true Scaffold6251: 443253-450593 Boechera stricta
Bostr.6251s0092 1.0kb upstream 1.0kb upstream 1000 false Scaffold6251: 449594-450593 Boechera stricta
Bostr.6251s0092 1.0kb downstream 1.0kb downstream 7341 true Scaffold6251: 442253-449593 Boechera stricta
Bostr.6251s0092 1.0kb downstream 1.0kb downstream 1000 false Scaffold6251: 442253-443252 Boechera stricta
Bostr.6251s0092 2.0kb upstream 2.0kb upstream 8341 true Scaffold6251: 443253-451593 Boechera stricta
Bostr.6251s0092 2.0kb upstream 2.0kb upstream 2000 false Scaffold6251: 449594-451593 Boechera stricta
Bostr.6251s0092 2.0kb downstream 2.0kb downstream 8341 true Scaffold6251: 441253-449593 Boechera stricta
Bostr.6251s0092 2.0kb downstream 2.0kb downstream 2000 false Scaffold6251: 441253-443252 Boechera stricta
Bostr.6251s0092 5.0kb upstream 5.0kb upstream 11341 true Scaffold6251: 443253-454593 Boechera stricta
Bostr.6251s0092 5.0kb upstream 5.0kb upstream 5000 false Scaffold6251: 449594-454593 Boechera stricta
Bostr.6251s0092 5.0kb downstream 5.0kb downstream 11341 true Scaffold6251: 438253-449593 Boechera stricta
Bostr.6251s0092 5.0kb downstream 5.0kb downstream 5000 false Scaffold6251: 438253-443252 Boechera stricta
Bostr.6251s0092 10.0kb upstream 10.0kb upstream 16341 true Scaffold6251: 443253-459593 Boechera stricta
Bostr.6251s0092 10.0kb upstream 10.0kb upstream 10000 false Scaffold6251: 449594-459593 Boechera stricta
Bostr.6251s0092 10.0kb downstream 10.0kb downstream 16341 true Scaffold6251: 433253-449593 Boechera stricta
Bostr.6251s0092 10.0kb downstream 10.0kb downstream 10000 false Scaffold6251: 433253-443252 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373668 5261 Brassicaceae View MSA
123831274 5264 Brassicales-Malvales View MSA
124345014 5266 SBM View MSA
124239012 5268 Malvidae View MSA
124067188 5270 Rosid View MSA
123742065 5271 Pentapetalae View MSA
122791552 5272 Eudicot View MSA
122044785 5273 Angiosperm View MSA
121347520 5274 Embryophyte View MSA
123424894 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain