Gene : Bostr.2618s0058 B. stricta v1.2
Defline:  (1 of 1) 2.5.1.32 - 15-cis-phytoene synthase / PSase Genomic Order:  58
Name:  ? Bostr.2618s0058 Secondary Identifier:  ? PAC:30665488
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2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstricta CAROTENOID-PWY Boechera stricta pathologic  
Bstricta PWY-6475 Boechera stricta pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.2618s0058 0.5kb upstream 0.5kb upstream 3681 true Scaffold2618: 293687-297367 Boechera stricta
Bostr.2618s0058 0.5kb upstream 0.5kb upstream 500 false Scaffold2618: 296868-297367 Boechera stricta
Bostr.2618s0058 0.5kb downstream 0.5kb downstream 3681 true Scaffold2618: 293187-296867 Boechera stricta
Bostr.2618s0058 0.5kb downstream 0.5kb downstream 500 false Scaffold2618: 293187-293686 Boechera stricta
Bostr.2618s0058 1.0kb upstream 1.0kb upstream 4181 true Scaffold2618: 293687-297867 Boechera stricta
Bostr.2618s0058 1.0kb upstream 1.0kb upstream 1000 false Scaffold2618: 296868-297867 Boechera stricta
Bostr.2618s0058 1.0kb downstream 1.0kb downstream 4181 true Scaffold2618: 292687-296867 Boechera stricta
Bostr.2618s0058 1.0kb downstream 1.0kb downstream 1000 false Scaffold2618: 292687-293686 Boechera stricta
Bostr.2618s0058 2.0kb upstream 2.0kb upstream 5181 true Scaffold2618: 293687-298867 Boechera stricta
Bostr.2618s0058 2.0kb upstream 2.0kb upstream 2000 false Scaffold2618: 296868-298867 Boechera stricta
Bostr.2618s0058 2.0kb downstream 2.0kb downstream 5181 true Scaffold2618: 291687-296867 Boechera stricta
Bostr.2618s0058 2.0kb downstream 2.0kb downstream 2000 false Scaffold2618: 291687-293686 Boechera stricta
Bostr.2618s0058 5.0kb upstream 5.0kb upstream 8181 true Scaffold2618: 293687-301867 Boechera stricta
Bostr.2618s0058 5.0kb upstream 5.0kb upstream 5000 false Scaffold2618: 296868-301867 Boechera stricta
Bostr.2618s0058 5.0kb downstream 5.0kb downstream 8181 true Scaffold2618: 288687-296867 Boechera stricta
Bostr.2618s0058 5.0kb downstream 5.0kb downstream 5000 false Scaffold2618: 288687-293686 Boechera stricta
Bostr.2618s0058 10.0kb upstream 10.0kb upstream 13181 true Scaffold2618: 293687-306867 Boechera stricta
Bostr.2618s0058 10.0kb upstream 10.0kb upstream 10000 false Scaffold2618: 296868-306867 Boechera stricta
Bostr.2618s0058 10.0kb downstream 10.0kb downstream 13181 true Scaffold2618: 283687-296867 Boechera stricta
Bostr.2618s0058 10.0kb downstream 10.0kb downstream 10000 false Scaffold2618: 283687-293686 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041269 5273 Angiosperm View MSA
122366550 5261 Brassicaceae View MSA
123829809 5264 Brassicales-Malvales View MSA
124345575 5266 SBM View MSA
124251202 5268 Malvidae View MSA
124069921 5270 Rosid View MSA
123743557 5271 Pentapetalae View MSA
122795955 5272 Eudicot View MSA
121345575 5274 Embryophyte View MSA
123426823 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain