Gene : Bostr.2570s0240 B. stricta v1.2
Defline:  (1 of 14) PF03108//PF04434//PF10551 - MuDR family transposase (DBD_Tnp_Mut) // SWIM zinc finger (SWIM) // MULE transposase domain (MULE) Genomic Order:  240
Name:  ? Bostr.2570s0240 Secondary Identifier:  ? PAC:30666407
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.2570s0240 0.5kb upstream 0.5kb upstream 4544 true Scaffold2570: 1184324-1188867 Boechera stricta
Bostr.2570s0240 0.5kb upstream 0.5kb upstream 500 false Scaffold2570: 1188368-1188867 Boechera stricta
Bostr.2570s0240 0.5kb downstream 0.5kb downstream 4544 true Scaffold2570: 1183824-1188367 Boechera stricta
Bostr.2570s0240 0.5kb downstream 0.5kb downstream 500 false Scaffold2570: 1183824-1184323 Boechera stricta
Bostr.2570s0240 1.0kb upstream 1.0kb upstream 5044 true Scaffold2570: 1184324-1189367 Boechera stricta
Bostr.2570s0240 1.0kb upstream 1.0kb upstream 1000 false Scaffold2570: 1188368-1189367 Boechera stricta
Bostr.2570s0240 1.0kb downstream 1.0kb downstream 5044 true Scaffold2570: 1183324-1188367 Boechera stricta
Bostr.2570s0240 1.0kb downstream 1.0kb downstream 1000 false Scaffold2570: 1183324-1184323 Boechera stricta
Bostr.2570s0240 2.0kb upstream 2.0kb upstream 6044 true Scaffold2570: 1184324-1190367 Boechera stricta
Bostr.2570s0240 2.0kb upstream 2.0kb upstream 2000 false Scaffold2570: 1188368-1190367 Boechera stricta
Bostr.2570s0240 2.0kb downstream 2.0kb downstream 6044 true Scaffold2570: 1182324-1188367 Boechera stricta
Bostr.2570s0240 2.0kb downstream 2.0kb downstream 2000 false Scaffold2570: 1182324-1184323 Boechera stricta
Bostr.2570s0240 5.0kb upstream 5.0kb upstream 9044 true Scaffold2570: 1184324-1193367 Boechera stricta
Bostr.2570s0240 5.0kb upstream 5.0kb upstream 5000 false Scaffold2570: 1188368-1193367 Boechera stricta
Bostr.2570s0240 5.0kb downstream 5.0kb downstream 9044 true Scaffold2570: 1179324-1188367 Boechera stricta
Bostr.2570s0240 5.0kb downstream 5.0kb downstream 5000 false Scaffold2570: 1179324-1184323 Boechera stricta
Bostr.2570s0240 10.0kb upstream 10.0kb upstream 14044 true Scaffold2570: 1184324-1198367 Boechera stricta
Bostr.2570s0240 10.0kb upstream 10.0kb upstream 10000 false Scaffold2570: 1188368-1198367 Boechera stricta
Bostr.2570s0240 10.0kb downstream 10.0kb downstream 14044 true Scaffold2570: 1174324-1188367 Boechera stricta
Bostr.2570s0240 10.0kb downstream 10.0kb downstream 10000 false Scaffold2570: 1174324-1184323 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377547 5261 Brassicaceae View MSA
123836717 5264 Brassicales-Malvales View MSA
124346447 5266 SBM View MSA
124250884 5268 Malvidae View MSA
124072231 5270 Rosid View MSA
123753345 5271 Pentapetalae View MSA
122797917 5272 Eudicot View MSA
122051679 5273 Angiosperm View MSA
121351767 5274 Embryophyte View MSA
123382313 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain