Gene : Bostr.6864s0080 B. stricta v1.2
Defline:  (1 of 1) PTHR11954:SF25 - LS1-LIKE PROTEIN Genomic Order:  80
Name:  ? Bostr.6864s0080 Secondary Identifier:  ? PAC:30672608
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstricta PWY-6498 Boechera stricta pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.6864s0080 0.5kb upstream 0.5kb upstream 3893 true Scaffold6864: 393019-396911 Boechera stricta
Bostr.6864s0080 0.5kb upstream 0.5kb upstream 500 false Scaffold6864: 393019-393518 Boechera stricta
Bostr.6864s0080 0.5kb downstream 0.5kb downstream 3893 true Scaffold6864: 393519-397411 Boechera stricta
Bostr.6864s0080 0.5kb downstream 0.5kb downstream 500 false Scaffold6864: 396912-397411 Boechera stricta
Bostr.6864s0080 1.0kb upstream 1.0kb upstream 4393 true Scaffold6864: 392519-396911 Boechera stricta
Bostr.6864s0080 1.0kb upstream 1.0kb upstream 1000 false Scaffold6864: 392519-393518 Boechera stricta
Bostr.6864s0080 1.0kb downstream 1.0kb downstream 4393 true Scaffold6864: 393519-397911 Boechera stricta
Bostr.6864s0080 1.0kb downstream 1.0kb downstream 1000 false Scaffold6864: 396912-397911 Boechera stricta
Bostr.6864s0080 2.0kb upstream 2.0kb upstream 5393 true Scaffold6864: 391519-396911 Boechera stricta
Bostr.6864s0080 2.0kb upstream 2.0kb upstream 2000 false Scaffold6864: 391519-393518 Boechera stricta
Bostr.6864s0080 2.0kb downstream 2.0kb downstream 5393 true Scaffold6864: 393519-398911 Boechera stricta
Bostr.6864s0080 2.0kb downstream 2.0kb downstream 2000 false Scaffold6864: 396912-398911 Boechera stricta
Bostr.6864s0080 5.0kb upstream 5.0kb upstream 8393 true Scaffold6864: 388519-396911 Boechera stricta
Bostr.6864s0080 5.0kb upstream 5.0kb upstream 5000 false Scaffold6864: 388519-393518 Boechera stricta
Bostr.6864s0080 5.0kb downstream 5.0kb downstream 8393 true Scaffold6864: 393519-401911 Boechera stricta
Bostr.6864s0080 5.0kb downstream 5.0kb downstream 5000 false Scaffold6864: 396912-401911 Boechera stricta
Bostr.6864s0080 10.0kb upstream 10.0kb upstream 13393 true Scaffold6864: 383519-396911 Boechera stricta
Bostr.6864s0080 10.0kb upstream 10.0kb upstream 10000 false Scaffold6864: 383519-393518 Boechera stricta
Bostr.6864s0080 10.0kb downstream 10.0kb downstream 13393 true Scaffold6864: 393519-406911 Boechera stricta
Bostr.6864s0080 10.0kb downstream 10.0kb downstream 10000 false Scaffold6864: 396912-406911 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026284 5273 Angiosperm View MSA
122378131 5261 Brassicaceae View MSA
123836662 5264 Brassicales-Malvales View MSA
124346688 5266 SBM View MSA
124250805 5268 Malvidae View MSA
124069445 5270 Rosid View MSA
123741534 5271 Pentapetalae View MSA
122794012 5272 Eudicot View MSA
121349175 5274 Embryophyte View MSA
123424544 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain