Gene : Bostr.7128s0163 B. stricta v1.2

Defline:  (1 of 9) PF01535//PF13812 - PPR repeat (PPR) // Pentatricopeptide repeat domain (PPR_3) Genomic Order:  163
Name:  ? Bostr.7128s0163 Secondary Identifier:  ? PAC:30660234

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.7128s0163 0.5kb upstream 0.5kb upstream 3571 true Scaffold7128: 790165-793735 Boechera stricta
Bostr.7128s0163 0.5kb upstream 0.5kb upstream 500 false Scaffold7128: 790165-790664 Boechera stricta
Bostr.7128s0163 0.5kb downstream 0.5kb downstream 3571 true Scaffold7128: 790665-794235 Boechera stricta
Bostr.7128s0163 0.5kb downstream 0.5kb downstream 500 false Scaffold7128: 793736-794235 Boechera stricta
Bostr.7128s0163 1.0kb upstream 1.0kb upstream 4071 true Scaffold7128: 789665-793735 Boechera stricta
Bostr.7128s0163 1.0kb upstream 1.0kb upstream 1000 false Scaffold7128: 789665-790664 Boechera stricta
Bostr.7128s0163 1.0kb downstream 1.0kb downstream 4071 true Scaffold7128: 790665-794735 Boechera stricta
Bostr.7128s0163 1.0kb downstream 1.0kb downstream 1000 false Scaffold7128: 793736-794735 Boechera stricta
Bostr.7128s0163 2.0kb upstream 2.0kb upstream 5071 true Scaffold7128: 788665-793735 Boechera stricta
Bostr.7128s0163 2.0kb upstream 2.0kb upstream 2000 false Scaffold7128: 788665-790664 Boechera stricta
Bostr.7128s0163 2.0kb downstream 2.0kb downstream 5071 true Scaffold7128: 790665-795735 Boechera stricta
Bostr.7128s0163 2.0kb downstream 2.0kb downstream 2000 false Scaffold7128: 793736-795735 Boechera stricta
Bostr.7128s0163 5.0kb upstream 5.0kb upstream 8071 true Scaffold7128: 785665-793735 Boechera stricta
Bostr.7128s0163 5.0kb upstream 5.0kb upstream 5000 false Scaffold7128: 785665-790664 Boechera stricta
Bostr.7128s0163 5.0kb downstream 5.0kb downstream 8071 true Scaffold7128: 790665-798735 Boechera stricta
Bostr.7128s0163 5.0kb downstream 5.0kb downstream 5000 false Scaffold7128: 793736-798735 Boechera stricta
Bostr.7128s0163 10.0kb upstream 10.0kb upstream 13071 true Scaffold7128: 780665-793735 Boechera stricta
Bostr.7128s0163 10.0kb upstream 10.0kb upstream 10000 false Scaffold7128: 780665-790664 Boechera stricta
Bostr.7128s0163 10.0kb downstream 10.0kb downstream 13071 true Scaffold7128: 790665-803735 Boechera stricta
Bostr.7128s0163 10.0kb downstream 10.0kb downstream 10000 false Scaffold7128: 793736-803735 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363716 5261 Brassicaceae View MSA
123838872 5264 Brassicales-Malvales View MSA
124337336 5266 SBM View MSA
124238154 5268 Malvidae View MSA
124068490 5270 Rosid View MSA
123736856 5271 Pentapetalae View MSA
122790484 5272 Eudicot View MSA
122044724 5273 Angiosperm View MSA
121351065 5274 Embryophyte View MSA
123381996 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain