Gene : Bostr.7128s0041 B. stricta v1.2
Defline:  (1 of 1) PTHR18896:SF79 - PHOSPHOLIPASE D EPSILON Genomic Order:  41
Name:  ? Bostr.7128s0041 Secondary Identifier:  ? PAC:30660513
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstricta LIPASYN-PWY Boechera stricta pathologic  
Bstricta PWY-3561 Boechera stricta pathologic  
Bstricta PWY-7039 Boechera stricta pathologic  

Genomics

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Gene Structure Displayer

Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.7128s0041 0.5kb upstream 0.5kb upstream 3148 true Scaffold7128: 290152-293299 Boechera stricta
Bostr.7128s0041 0.5kb upstream 0.5kb upstream 500 false Scaffold7128: 290152-290651 Boechera stricta
Bostr.7128s0041 0.5kb downstream 0.5kb downstream 3148 true Scaffold7128: 290652-293799 Boechera stricta
Bostr.7128s0041 0.5kb downstream 0.5kb downstream 500 false Scaffold7128: 293300-293799 Boechera stricta
Bostr.7128s0041 1.0kb upstream 1.0kb upstream 3648 true Scaffold7128: 289652-293299 Boechera stricta
Bostr.7128s0041 1.0kb upstream 1.0kb upstream 1000 false Scaffold7128: 289652-290651 Boechera stricta
Bostr.7128s0041 1.0kb downstream 1.0kb downstream 3648 true Scaffold7128: 290652-294299 Boechera stricta
Bostr.7128s0041 1.0kb downstream 1.0kb downstream 1000 false Scaffold7128: 293300-294299 Boechera stricta
Bostr.7128s0041 2.0kb upstream 2.0kb upstream 4648 true Scaffold7128: 288652-293299 Boechera stricta
Bostr.7128s0041 2.0kb upstream 2.0kb upstream 2000 false Scaffold7128: 288652-290651 Boechera stricta
Bostr.7128s0041 2.0kb downstream 2.0kb downstream 4648 true Scaffold7128: 290652-295299 Boechera stricta
Bostr.7128s0041 2.0kb downstream 2.0kb downstream 2000 false Scaffold7128: 293300-295299 Boechera stricta
Bostr.7128s0041 5.0kb upstream 5.0kb upstream 7648 true Scaffold7128: 285652-293299 Boechera stricta
Bostr.7128s0041 5.0kb upstream 5.0kb upstream 5000 false Scaffold7128: 285652-290651 Boechera stricta
Bostr.7128s0041 5.0kb downstream 5.0kb downstream 7648 true Scaffold7128: 290652-298299 Boechera stricta
Bostr.7128s0041 5.0kb downstream 5.0kb downstream 5000 false Scaffold7128: 293300-298299 Boechera stricta
Bostr.7128s0041 10.0kb upstream 10.0kb upstream 12648 true Scaffold7128: 280652-293299 Boechera stricta
Bostr.7128s0041 10.0kb upstream 10.0kb upstream 10000 false Scaffold7128: 280652-290651 Boechera stricta
Bostr.7128s0041 10.0kb downstream 10.0kb downstream 12648 true Scaffold7128: 290652-303299 Boechera stricta
Bostr.7128s0041 10.0kb downstream 10.0kb downstream 10000 false Scaffold7128: 293300-303299 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361991 5261 Brassicaceae View MSA
123828918 5264 Brassicales-Malvales View MSA
124342668 5266 SBM View MSA
124242192 5268 Malvidae View MSA
124061086 5270 Rosid View MSA
123739430 5271 Pentapetalae View MSA
122786785 5272 Eudicot View MSA
122045742 5273 Angiosperm View MSA
121310493 5274 Embryophyte View MSA
123347963 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain