Gene : Bostr.7128s0649 B. stricta v1.2

Defline:  (1 of 3) 6.2.1.1//6.2.1.2 - Acetate--CoA ligase / Acyl-activating enzyme // Butyrate--CoA ligase / Fatty acid thiokinase (medium chain) Genomic Order:  649
Name:  ? Bostr.7128s0649 Secondary Identifier:  ? PAC:30659989

Sequence Feature Displayer

Ontology Annotation Displayer

13 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstricta PWY-1121 Boechera stricta pathologic  
Bstricta PWY-321 Boechera stricta pathologic  
Bstricta PWY-5136 Boechera stricta pathologic  
Bstricta PWY-5143 Boechera stricta pathologic  
Bstricta PWY-5147 Boechera stricta pathologic  
Bstricta PWY-5156 Boechera stricta pathologic  
Bstricta PWY-561 Boechera stricta pathologic  
Bstricta PWY-5885 Boechera stricta pathologic  
Bstricta PWY-5971 Boechera stricta pathologic  
Bstricta PWY-5989 Boechera stricta pathologic  
Bstricta PWY66-21 Boechera stricta pathologic  
Bstricta PWY-6733 Boechera stricta pathologic  
Bstricta PWY-6803 Boechera stricta pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.7128s0649 0.5kb upstream 0.5kb upstream 2552 true Scaffold7128: 3038875-3041426 Boechera stricta
Bostr.7128s0649 0.5kb upstream 0.5kb upstream 500 false Scaffold7128: 3040927-3041426 Boechera stricta
Bostr.7128s0649 0.5kb downstream 0.5kb downstream 2552 true Scaffold7128: 3038375-3040926 Boechera stricta
Bostr.7128s0649 0.5kb downstream 0.5kb downstream 500 false Scaffold7128: 3038375-3038874 Boechera stricta
Bostr.7128s0649 1.0kb upstream 1.0kb upstream 3052 true Scaffold7128: 3038875-3041926 Boechera stricta
Bostr.7128s0649 1.0kb upstream 1.0kb upstream 1000 false Scaffold7128: 3040927-3041926 Boechera stricta
Bostr.7128s0649 1.0kb downstream 1.0kb downstream 3052 true Scaffold7128: 3037875-3040926 Boechera stricta
Bostr.7128s0649 1.0kb downstream 1.0kb downstream 1000 false Scaffold7128: 3037875-3038874 Boechera stricta
Bostr.7128s0649 2.0kb upstream 2.0kb upstream 4052 true Scaffold7128: 3038875-3042926 Boechera stricta
Bostr.7128s0649 2.0kb upstream 2.0kb upstream 2000 false Scaffold7128: 3040927-3042926 Boechera stricta
Bostr.7128s0649 2.0kb downstream 2.0kb downstream 4052 true Scaffold7128: 3036875-3040926 Boechera stricta
Bostr.7128s0649 2.0kb downstream 2.0kb downstream 2000 false Scaffold7128: 3036875-3038874 Boechera stricta
Bostr.7128s0649 5.0kb upstream 5.0kb upstream 7052 true Scaffold7128: 3038875-3045926 Boechera stricta
Bostr.7128s0649 5.0kb upstream 5.0kb upstream 5000 false Scaffold7128: 3040927-3045926 Boechera stricta
Bostr.7128s0649 5.0kb downstream 5.0kb downstream 7052 true Scaffold7128: 3033875-3040926 Boechera stricta
Bostr.7128s0649 5.0kb downstream 5.0kb downstream 5000 false Scaffold7128: 3033875-3038874 Boechera stricta
Bostr.7128s0649 10.0kb upstream 10.0kb upstream 12052 true Scaffold7128: 3038875-3050926 Boechera stricta
Bostr.7128s0649 10.0kb upstream 10.0kb upstream 10000 false Scaffold7128: 3040927-3050926 Boechera stricta
Bostr.7128s0649 10.0kb downstream 10.0kb downstream 12052 true Scaffold7128: 3028875-3040926 Boechera stricta
Bostr.7128s0649 10.0kb downstream 10.0kb downstream 10000 false Scaffold7128: 3028875-3038874 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373385 5261 Brassicaceae View MSA
123831950 5264 Brassicales-Malvales View MSA
124346477 5266 SBM View MSA
124241808 5268 Malvidae View MSA
124066273 5270 Rosid View MSA
123743208 5271 Pentapetalae View MSA
122788469 5272 Eudicot View MSA
122048033 5273 Angiosperm View MSA
121349536 5274 Embryophyte View MSA
123427881 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain