Gene : Bostr.7128s0336 B. stricta v1.2

Defline:  (1 of 7) PTHR24093:SF355 - ATPASE 1, PLASMA MEMBRANE-TYPE-RELATED Genomic Order:  336
Name:  ? Bostr.7128s0336 Secondary Identifier:  ? PAC:30660416

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.7128s0336 0.5kb upstream 0.5kb upstream 6701 true Scaffold7128: 1492375-1499075 Boechera stricta
Bostr.7128s0336 0.5kb upstream 0.5kb upstream 500 false Scaffold7128: 1492375-1492874 Boechera stricta
Bostr.7128s0336 0.5kb downstream 0.5kb downstream 6701 true Scaffold7128: 1492875-1499575 Boechera stricta
Bostr.7128s0336 0.5kb downstream 0.5kb downstream 500 false Scaffold7128: 1499076-1499575 Boechera stricta
Bostr.7128s0336 1.0kb upstream 1.0kb upstream 7201 true Scaffold7128: 1491875-1499075 Boechera stricta
Bostr.7128s0336 1.0kb upstream 1.0kb upstream 1000 false Scaffold7128: 1491875-1492874 Boechera stricta
Bostr.7128s0336 1.0kb downstream 1.0kb downstream 7201 true Scaffold7128: 1492875-1500075 Boechera stricta
Bostr.7128s0336 1.0kb downstream 1.0kb downstream 1000 false Scaffold7128: 1499076-1500075 Boechera stricta
Bostr.7128s0336 2.0kb upstream 2.0kb upstream 8201 true Scaffold7128: 1490875-1499075 Boechera stricta
Bostr.7128s0336 2.0kb upstream 2.0kb upstream 2000 false Scaffold7128: 1490875-1492874 Boechera stricta
Bostr.7128s0336 2.0kb downstream 2.0kb downstream 8201 true Scaffold7128: 1492875-1501075 Boechera stricta
Bostr.7128s0336 2.0kb downstream 2.0kb downstream 2000 false Scaffold7128: 1499076-1501075 Boechera stricta
Bostr.7128s0336 5.0kb upstream 5.0kb upstream 11201 true Scaffold7128: 1487875-1499075 Boechera stricta
Bostr.7128s0336 5.0kb upstream 5.0kb upstream 5000 false Scaffold7128: 1487875-1492874 Boechera stricta
Bostr.7128s0336 5.0kb downstream 5.0kb downstream 11201 true Scaffold7128: 1492875-1504075 Boechera stricta
Bostr.7128s0336 5.0kb downstream 5.0kb downstream 5000 false Scaffold7128: 1499076-1504075 Boechera stricta
Bostr.7128s0336 10.0kb upstream 10.0kb upstream 16201 true Scaffold7128: 1482875-1499075 Boechera stricta
Bostr.7128s0336 10.0kb upstream 10.0kb upstream 10000 false Scaffold7128: 1482875-1492874 Boechera stricta
Bostr.7128s0336 10.0kb downstream 10.0kb downstream 16201 true Scaffold7128: 1492875-1509075 Boechera stricta
Bostr.7128s0336 10.0kb downstream 10.0kb downstream 10000 false Scaffold7128: 1499076-1509075 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369101 5261 Brassicaceae View MSA
123835876 5264 Brassicales-Malvales View MSA
124336649 5266 SBM View MSA
124248351 5268 Malvidae View MSA
124069030 5270 Rosid View MSA
123751017 5271 Pentapetalae View MSA
122796712 5272 Eudicot View MSA
122050656 5273 Angiosperm View MSA
121349531 5274 Embryophyte View MSA
123428375 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain