Gene : Bostr.7128s0566 B. stricta v1.2

Defline:  (1 of 2) PTHR15160:SF3 - BIFUNCTIONAL NUCLEASE 1-RELATED Genomic Order:  566
Name:  ? Bostr.7128s0566 Secondary Identifier:  ? PAC:30660035

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.7128s0566 0.5kb upstream 0.5kb upstream 3342 true Scaffold7128: 2590400-2593741 Boechera stricta
Bostr.7128s0566 0.5kb upstream 0.5kb upstream 500 false Scaffold7128: 2593242-2593741 Boechera stricta
Bostr.7128s0566 0.5kb downstream 0.5kb downstream 3342 true Scaffold7128: 2589900-2593241 Boechera stricta
Bostr.7128s0566 0.5kb downstream 0.5kb downstream 500 false Scaffold7128: 2589900-2590399 Boechera stricta
Bostr.7128s0566 1.0kb upstream 1.0kb upstream 3842 true Scaffold7128: 2590400-2594241 Boechera stricta
Bostr.7128s0566 1.0kb upstream 1.0kb upstream 1000 false Scaffold7128: 2593242-2594241 Boechera stricta
Bostr.7128s0566 1.0kb downstream 1.0kb downstream 3842 true Scaffold7128: 2589400-2593241 Boechera stricta
Bostr.7128s0566 1.0kb downstream 1.0kb downstream 1000 false Scaffold7128: 2589400-2590399 Boechera stricta
Bostr.7128s0566 2.0kb upstream 2.0kb upstream 4842 true Scaffold7128: 2590400-2595241 Boechera stricta
Bostr.7128s0566 2.0kb upstream 2.0kb upstream 2000 false Scaffold7128: 2593242-2595241 Boechera stricta
Bostr.7128s0566 2.0kb downstream 2.0kb downstream 4842 true Scaffold7128: 2588400-2593241 Boechera stricta
Bostr.7128s0566 2.0kb downstream 2.0kb downstream 2000 false Scaffold7128: 2588400-2590399 Boechera stricta
Bostr.7128s0566 5.0kb upstream 5.0kb upstream 7842 true Scaffold7128: 2590400-2598241 Boechera stricta
Bostr.7128s0566 5.0kb upstream 5.0kb upstream 5000 false Scaffold7128: 2593242-2598241 Boechera stricta
Bostr.7128s0566 5.0kb downstream 5.0kb downstream 7842 true Scaffold7128: 2585400-2593241 Boechera stricta
Bostr.7128s0566 5.0kb downstream 5.0kb downstream 5000 false Scaffold7128: 2585400-2590399 Boechera stricta
Bostr.7128s0566 10.0kb upstream 10.0kb upstream 12842 true Scaffold7128: 2590400-2603241 Boechera stricta
Bostr.7128s0566 10.0kb upstream 10.0kb upstream 10000 false Scaffold7128: 2593242-2603241 Boechera stricta
Bostr.7128s0566 10.0kb downstream 10.0kb downstream 12842 true Scaffold7128: 2580400-2593241 Boechera stricta
Bostr.7128s0566 10.0kb downstream 10.0kb downstream 10000 false Scaffold7128: 2580400-2590399 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122380470 5261 Brassicaceae View MSA
123833088 5264 Brassicales-Malvales View MSA
124345202 5266 SBM View MSA
124242607 5268 Malvidae View MSA
124063334 5270 Rosid View MSA
123751879 5271 Pentapetalae View MSA
122794039 5272 Eudicot View MSA
122042536 5273 Angiosperm View MSA
121348555 5274 Embryophyte View MSA
123425976 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain