Gene : Bostr.7867s0379 B. stricta v1.2
Defline:  (1 of 1) PTHR21266:SF25 - PROTOCHLOROPHYLLIDE-DEPENDENT TRANSLOCON COMPONENT 52, CHLOROPLASTIC Genomic Order:  379
Name:  ? Bostr.7867s0379 Secondary Identifier:  ? PAC:30657466
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstricta PWY-5098 Boechera stricta pathologic  
Bstricta PWY-6927 Boechera stricta pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.7867s0379 0.5kb upstream 0.5kb upstream 2881 true Scaffold7867: 1996105-1998985 Boechera stricta
Bostr.7867s0379 0.5kb upstream 0.5kb upstream 500 false Scaffold7867: 1998486-1998985 Boechera stricta
Bostr.7867s0379 0.5kb downstream 0.5kb downstream 2881 true Scaffold7867: 1995605-1998485 Boechera stricta
Bostr.7867s0379 0.5kb downstream 0.5kb downstream 500 false Scaffold7867: 1995605-1996104 Boechera stricta
Bostr.7867s0379 1.0kb upstream 1.0kb upstream 3381 true Scaffold7867: 1996105-1999485 Boechera stricta
Bostr.7867s0379 1.0kb upstream 1.0kb upstream 1000 false Scaffold7867: 1998486-1999485 Boechera stricta
Bostr.7867s0379 1.0kb downstream 1.0kb downstream 3381 true Scaffold7867: 1995105-1998485 Boechera stricta
Bostr.7867s0379 1.0kb downstream 1.0kb downstream 1000 false Scaffold7867: 1995105-1996104 Boechera stricta
Bostr.7867s0379 2.0kb upstream 2.0kb upstream 4381 true Scaffold7867: 1996105-2000485 Boechera stricta
Bostr.7867s0379 2.0kb upstream 2.0kb upstream 2000 false Scaffold7867: 1998486-2000485 Boechera stricta
Bostr.7867s0379 2.0kb downstream 2.0kb downstream 4381 true Scaffold7867: 1994105-1998485 Boechera stricta
Bostr.7867s0379 2.0kb downstream 2.0kb downstream 2000 false Scaffold7867: 1994105-1996104 Boechera stricta
Bostr.7867s0379 5.0kb upstream 5.0kb upstream 7381 true Scaffold7867: 1996105-2003485 Boechera stricta
Bostr.7867s0379 5.0kb upstream 5.0kb upstream 5000 false Scaffold7867: 1998486-2003485 Boechera stricta
Bostr.7867s0379 5.0kb downstream 5.0kb downstream 7381 true Scaffold7867: 1991105-1998485 Boechera stricta
Bostr.7867s0379 5.0kb downstream 5.0kb downstream 5000 false Scaffold7867: 1991105-1996104 Boechera stricta
Bostr.7867s0379 10.0kb upstream 10.0kb upstream 12381 true Scaffold7867: 1996105-2008485 Boechera stricta
Bostr.7867s0379 10.0kb upstream 10.0kb upstream 10000 false Scaffold7867: 1998486-2008485 Boechera stricta
Bostr.7867s0379 10.0kb downstream 10.0kb downstream 12381 true Scaffold7867: 1986105-1998485 Boechera stricta
Bostr.7867s0379 10.0kb downstream 10.0kb downstream 10000 false Scaffold7867: 1986105-1996104 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370768 5261 Brassicaceae View MSA
123828575 5264 Brassicales-Malvales View MSA
124336609 5266 SBM View MSA
124240236 5268 Malvidae View MSA
124064980 5270 Rosid View MSA
123746425 5271 Pentapetalae View MSA
122797838 5272 Eudicot View MSA
122045189 5273 Angiosperm View MSA
123429167 5275 Viridiplantae View MSA
121347962 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain