Gene : Bostr.7867s0017 B. stricta v1.2
Defline:  (1 of 2) PTHR13773//PTHR13773:SF13 - PHOSPHATIDATE CYTIDYLYLTRANSFERASE Genomic Order:  17
Name:  ? Bostr.7867s0017 Secondary Identifier:  ? PAC:30658254
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstricta PWY0-1319 Boechera stricta pathologic  
Bstricta PWY4FS-7 Boechera stricta pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.7867s0017 0.5kb upstream 0.5kb upstream 4115 true Scaffold7867: 68372-72486 Boechera stricta
Bostr.7867s0017 0.5kb upstream 0.5kb upstream 500 false Scaffold7867: 71987-72486 Boechera stricta
Bostr.7867s0017 0.5kb downstream 0.5kb downstream 4115 true Scaffold7867: 67872-71986 Boechera stricta
Bostr.7867s0017 0.5kb downstream 0.5kb downstream 500 false Scaffold7867: 67872-68371 Boechera stricta
Bostr.7867s0017 1.0kb upstream 1.0kb upstream 4615 true Scaffold7867: 68372-72986 Boechera stricta
Bostr.7867s0017 1.0kb upstream 1.0kb upstream 1000 false Scaffold7867: 71987-72986 Boechera stricta
Bostr.7867s0017 1.0kb downstream 1.0kb downstream 4615 true Scaffold7867: 67372-71986 Boechera stricta
Bostr.7867s0017 1.0kb downstream 1.0kb downstream 1000 false Scaffold7867: 67372-68371 Boechera stricta
Bostr.7867s0017 2.0kb upstream 2.0kb upstream 5615 true Scaffold7867: 68372-73986 Boechera stricta
Bostr.7867s0017 2.0kb upstream 2.0kb upstream 2000 false Scaffold7867: 71987-73986 Boechera stricta
Bostr.7867s0017 2.0kb downstream 2.0kb downstream 5615 true Scaffold7867: 66372-71986 Boechera stricta
Bostr.7867s0017 2.0kb downstream 2.0kb downstream 2000 false Scaffold7867: 66372-68371 Boechera stricta
Bostr.7867s0017 5.0kb upstream 5.0kb upstream 8615 true Scaffold7867: 68372-76986 Boechera stricta
Bostr.7867s0017 5.0kb upstream 5.0kb upstream 5000 false Scaffold7867: 71987-76986 Boechera stricta
Bostr.7867s0017 5.0kb downstream 5.0kb downstream 8615 true Scaffold7867: 63372-71986 Boechera stricta
Bostr.7867s0017 5.0kb downstream 5.0kb downstream 5000 false Scaffold7867: 63372-68371 Boechera stricta
Bostr.7867s0017 10.0kb upstream 10.0kb upstream 13615 true Scaffold7867: 68372-81986 Boechera stricta
Bostr.7867s0017 10.0kb upstream 10.0kb upstream 10000 false Scaffold7867: 71987-81986 Boechera stricta
Bostr.7867s0017 10.0kb downstream 10.0kb downstream 13615 true Scaffold7867: 58372-71986 Boechera stricta
Bostr.7867s0017 10.0kb downstream 10.0kb downstream 10000 false Scaffold7867: 58372-68371 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372701 5261 Brassicaceae View MSA
123841401 5264 Brassicales-Malvales View MSA
124337420 5266 SBM View MSA
124243920 5268 Malvidae View MSA
124063669 5270 Rosid View MSA
123751234 5271 Pentapetalae View MSA
122787509 5272 Eudicot View MSA
122045670 5273 Angiosperm View MSA
121346295 5274 Embryophyte View MSA
123428107 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain