Gene : Bostr.7867s1547 B. stricta v1.2
Defline:  (1 of 4) PTHR33596:SF1 - COLD-REGULATED 413 PLASMA MEMBRANE PROTEIN 1-RELATED Genomic Order:  1547
Name:  ? Bostr.7867s1547 Secondary Identifier:  ? PAC:30658355
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.7867s1547 0.5kb upstream 0.5kb upstream 1619 true Scaffold7867: 7829545-7831163 Boechera stricta
Bostr.7867s1547 0.5kb upstream 0.5kb upstream 500 false Scaffold7867: 7830664-7831163 Boechera stricta
Bostr.7867s1547 0.5kb downstream 0.5kb downstream 1619 true Scaffold7867: 7829045-7830663 Boechera stricta
Bostr.7867s1547 0.5kb downstream 0.5kb downstream 500 false Scaffold7867: 7829045-7829544 Boechera stricta
Bostr.7867s1547 1.0kb upstream 1.0kb upstream 2119 true Scaffold7867: 7829545-7831663 Boechera stricta
Bostr.7867s1547 1.0kb upstream 1.0kb upstream 1000 false Scaffold7867: 7830664-7831663 Boechera stricta
Bostr.7867s1547 1.0kb downstream 1.0kb downstream 2119 true Scaffold7867: 7828545-7830663 Boechera stricta
Bostr.7867s1547 1.0kb downstream 1.0kb downstream 1000 false Scaffold7867: 7828545-7829544 Boechera stricta
Bostr.7867s1547 2.0kb upstream 2.0kb upstream 3119 true Scaffold7867: 7829545-7832663 Boechera stricta
Bostr.7867s1547 2.0kb upstream 2.0kb upstream 2000 false Scaffold7867: 7830664-7832663 Boechera stricta
Bostr.7867s1547 2.0kb downstream 2.0kb downstream 3119 true Scaffold7867: 7827545-7830663 Boechera stricta
Bostr.7867s1547 2.0kb downstream 2.0kb downstream 2000 false Scaffold7867: 7827545-7829544 Boechera stricta
Bostr.7867s1547 5.0kb upstream 5.0kb upstream 6119 true Scaffold7867: 7829545-7835663 Boechera stricta
Bostr.7867s1547 5.0kb upstream 5.0kb upstream 5000 false Scaffold7867: 7830664-7835663 Boechera stricta
Bostr.7867s1547 5.0kb downstream 5.0kb downstream 6119 true Scaffold7867: 7824545-7830663 Boechera stricta
Bostr.7867s1547 5.0kb downstream 5.0kb downstream 5000 false Scaffold7867: 7824545-7829544 Boechera stricta
Bostr.7867s1547 10.0kb upstream 10.0kb upstream 11119 true Scaffold7867: 7829545-7840663 Boechera stricta
Bostr.7867s1547 10.0kb upstream 10.0kb upstream 10000 false Scaffold7867: 7830664-7840663 Boechera stricta
Bostr.7867s1547 10.0kb downstream 10.0kb downstream 11119 true Scaffold7867: 7819545-7830663 Boechera stricta
Bostr.7867s1547 10.0kb downstream 10.0kb downstream 10000 false Scaffold7867: 7819545-7829544 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366593 5261 Brassicaceae View MSA
123837629 5264 Brassicales-Malvales View MSA
124338264 5266 SBM View MSA
124246161 5268 Malvidae View MSA
124069489 5270 Rosid View MSA
123743524 5271 Pentapetalae View MSA
122795591 5272 Eudicot View MSA
122043105 5273 Angiosperm View MSA
121346555 5274 Embryophyte View MSA
123380405 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain