Gene : Bostr.7867s1276 B. stricta v1.2

Defline:  (1 of 2) PTHR11699:SF171 - ALDEHYDE DEHYDROGENASE FAMILY 3 MEMBER I1, CHLOROPLASTIC Genomic Order:  1276
Name:  ? Bostr.7867s1276 Secondary Identifier:  ? PAC:30657683

Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstricta PWY-2724 Boechera stricta pathologic  
Bstricta PWY-6054 Boechera stricta pathologic  
Bstricta PWY66-21 Boechera stricta pathologic  
Bstricta PWY66-389 Boechera stricta pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.7867s1276 0.5kb upstream 0.5kb upstream 3573 true Scaffold7867: 6509324-6512896 Boechera stricta
Bostr.7867s1276 0.5kb upstream 0.5kb upstream 500 false Scaffold7867: 6509324-6509823 Boechera stricta
Bostr.7867s1276 0.5kb downstream 0.5kb downstream 3573 true Scaffold7867: 6509824-6513396 Boechera stricta
Bostr.7867s1276 0.5kb downstream 0.5kb downstream 500 false Scaffold7867: 6512897-6513396 Boechera stricta
Bostr.7867s1276 1.0kb upstream 1.0kb upstream 4073 true Scaffold7867: 6508824-6512896 Boechera stricta
Bostr.7867s1276 1.0kb upstream 1.0kb upstream 1000 false Scaffold7867: 6508824-6509823 Boechera stricta
Bostr.7867s1276 1.0kb downstream 1.0kb downstream 4073 true Scaffold7867: 6509824-6513896 Boechera stricta
Bostr.7867s1276 1.0kb downstream 1.0kb downstream 1000 false Scaffold7867: 6512897-6513896 Boechera stricta
Bostr.7867s1276 2.0kb upstream 2.0kb upstream 5073 true Scaffold7867: 6507824-6512896 Boechera stricta
Bostr.7867s1276 2.0kb upstream 2.0kb upstream 2000 false Scaffold7867: 6507824-6509823 Boechera stricta
Bostr.7867s1276 2.0kb downstream 2.0kb downstream 5073 true Scaffold7867: 6509824-6514896 Boechera stricta
Bostr.7867s1276 2.0kb downstream 2.0kb downstream 2000 false Scaffold7867: 6512897-6514896 Boechera stricta
Bostr.7867s1276 5.0kb upstream 5.0kb upstream 8073 true Scaffold7867: 6504824-6512896 Boechera stricta
Bostr.7867s1276 5.0kb upstream 5.0kb upstream 5000 false Scaffold7867: 6504824-6509823 Boechera stricta
Bostr.7867s1276 5.0kb downstream 5.0kb downstream 8073 true Scaffold7867: 6509824-6517896 Boechera stricta
Bostr.7867s1276 5.0kb downstream 5.0kb downstream 5000 false Scaffold7867: 6512897-6517896 Boechera stricta
Bostr.7867s1276 10.0kb upstream 10.0kb upstream 13073 true Scaffold7867: 6499824-6512896 Boechera stricta
Bostr.7867s1276 10.0kb upstream 10.0kb upstream 10000 false Scaffold7867: 6499824-6509823 Boechera stricta
Bostr.7867s1276 10.0kb downstream 10.0kb downstream 13073 true Scaffold7867: 6509824-6522896 Boechera stricta
Bostr.7867s1276 10.0kb downstream 10.0kb downstream 10000 false Scaffold7867: 6512897-6522896 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364929 5261 Brassicaceae View MSA
123831244 5264 Brassicales-Malvales View MSA
124337798 5266 SBM View MSA
124245156 5268 Malvidae View MSA
124071959 5270 Rosid View MSA
123741483 5271 Pentapetalae View MSA
122790699 5272 Eudicot View MSA
122047593 5273 Angiosperm View MSA
121349887 5274 Embryophyte View MSA
123425420 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain