Gene : Bostr.7867s1225 B. stricta v1.2
Defline:  (1 of 2) 6.1.1.12 - Aspartate--tRNA ligase / Aspartyl-tRNA synthetase Genomic Order:  1225
Name:  ? Bostr.7867s1225 Secondary Identifier:  ? PAC:30658706
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstricta TRNA-CHARGING-PWY Boechera stricta pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.7867s1225 0.5kb upstream 0.5kb upstream 4774 true Scaffold7867: 6231381-6236154 Boechera stricta
Bostr.7867s1225 0.5kb upstream 0.5kb upstream 500 false Scaffold7867: 6235655-6236154 Boechera stricta
Bostr.7867s1225 0.5kb downstream 0.5kb downstream 4774 true Scaffold7867: 6230881-6235654 Boechera stricta
Bostr.7867s1225 0.5kb downstream 0.5kb downstream 500 false Scaffold7867: 6230881-6231380 Boechera stricta
Bostr.7867s1225 1.0kb upstream 1.0kb upstream 5274 true Scaffold7867: 6231381-6236654 Boechera stricta
Bostr.7867s1225 1.0kb upstream 1.0kb upstream 1000 false Scaffold7867: 6235655-6236654 Boechera stricta
Bostr.7867s1225 1.0kb downstream 1.0kb downstream 5274 true Scaffold7867: 6230381-6235654 Boechera stricta
Bostr.7867s1225 1.0kb downstream 1.0kb downstream 1000 false Scaffold7867: 6230381-6231380 Boechera stricta
Bostr.7867s1225 2.0kb upstream 2.0kb upstream 6274 true Scaffold7867: 6231381-6237654 Boechera stricta
Bostr.7867s1225 2.0kb upstream 2.0kb upstream 2000 false Scaffold7867: 6235655-6237654 Boechera stricta
Bostr.7867s1225 2.0kb downstream 2.0kb downstream 6274 true Scaffold7867: 6229381-6235654 Boechera stricta
Bostr.7867s1225 2.0kb downstream 2.0kb downstream 2000 false Scaffold7867: 6229381-6231380 Boechera stricta
Bostr.7867s1225 5.0kb upstream 5.0kb upstream 9274 true Scaffold7867: 6231381-6240654 Boechera stricta
Bostr.7867s1225 5.0kb upstream 5.0kb upstream 5000 false Scaffold7867: 6235655-6240654 Boechera stricta
Bostr.7867s1225 5.0kb downstream 5.0kb downstream 9274 true Scaffold7867: 6226381-6235654 Boechera stricta
Bostr.7867s1225 5.0kb downstream 5.0kb downstream 5000 false Scaffold7867: 6226381-6231380 Boechera stricta
Bostr.7867s1225 10.0kb upstream 10.0kb upstream 14274 true Scaffold7867: 6231381-6245654 Boechera stricta
Bostr.7867s1225 10.0kb upstream 10.0kb upstream 10000 false Scaffold7867: 6235655-6245654 Boechera stricta
Bostr.7867s1225 10.0kb downstream 10.0kb downstream 14274 true Scaffold7867: 6221381-6235654 Boechera stricta
Bostr.7867s1225 10.0kb downstream 10.0kb downstream 10000 false Scaffold7867: 6221381-6231380 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368024 5261 Brassicaceae View MSA
123833366 5264 Brassicales-Malvales View MSA
124350265 5266 SBM View MSA
124243191 5268 Malvidae View MSA
124067030 5270 Rosid View MSA
123742204 5271 Pentapetalae View MSA
122792299 5272 Eudicot View MSA
122041718 5273 Angiosperm View MSA
121346039 5274 Embryophyte View MSA
123424871 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain