Gene : Bostr.7867s1257 B. stricta v1.2
Defline:  (1 of 1) PTHR10509//PTHR10509:SF23 - O-METHYLTRANSFERASE-RELATED Genomic Order:  1257
Name:  ? Bostr.7867s1257 Secondary Identifier:  ? PAC:30658807
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstricta PWY-1121 Boechera stricta pathologic  
Bstricta PWY-361 Boechera stricta pathologic  
Bstricta PWY-6039 Boechera stricta pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.7867s1257 0.5kb upstream 0.5kb upstream 1948 true Scaffold7867: 6426646-6428593 Boechera stricta
Bostr.7867s1257 0.5kb upstream 0.5kb upstream 500 false Scaffold7867: 6426646-6427145 Boechera stricta
Bostr.7867s1257 0.5kb downstream 0.5kb downstream 1948 true Scaffold7867: 6427146-6429093 Boechera stricta
Bostr.7867s1257 0.5kb downstream 0.5kb downstream 500 false Scaffold7867: 6428594-6429093 Boechera stricta
Bostr.7867s1257 1.0kb upstream 1.0kb upstream 2448 true Scaffold7867: 6426146-6428593 Boechera stricta
Bostr.7867s1257 1.0kb upstream 1.0kb upstream 1000 false Scaffold7867: 6426146-6427145 Boechera stricta
Bostr.7867s1257 1.0kb downstream 1.0kb downstream 2448 true Scaffold7867: 6427146-6429593 Boechera stricta
Bostr.7867s1257 1.0kb downstream 1.0kb downstream 1000 false Scaffold7867: 6428594-6429593 Boechera stricta
Bostr.7867s1257 2.0kb upstream 2.0kb upstream 3448 true Scaffold7867: 6425146-6428593 Boechera stricta
Bostr.7867s1257 2.0kb upstream 2.0kb upstream 2000 false Scaffold7867: 6425146-6427145 Boechera stricta
Bostr.7867s1257 2.0kb downstream 2.0kb downstream 3448 true Scaffold7867: 6427146-6430593 Boechera stricta
Bostr.7867s1257 2.0kb downstream 2.0kb downstream 2000 false Scaffold7867: 6428594-6430593 Boechera stricta
Bostr.7867s1257 5.0kb upstream 5.0kb upstream 6448 true Scaffold7867: 6422146-6428593 Boechera stricta
Bostr.7867s1257 5.0kb upstream 5.0kb upstream 5000 false Scaffold7867: 6422146-6427145 Boechera stricta
Bostr.7867s1257 5.0kb downstream 5.0kb downstream 6448 true Scaffold7867: 6427146-6433593 Boechera stricta
Bostr.7867s1257 5.0kb downstream 5.0kb downstream 5000 false Scaffold7867: 6428594-6433593 Boechera stricta
Bostr.7867s1257 10.0kb upstream 10.0kb upstream 11448 true Scaffold7867: 6417146-6428593 Boechera stricta
Bostr.7867s1257 10.0kb upstream 10.0kb upstream 10000 false Scaffold7867: 6417146-6427145 Boechera stricta
Bostr.7867s1257 10.0kb downstream 10.0kb downstream 11448 true Scaffold7867: 6427146-6438593 Boechera stricta
Bostr.7867s1257 10.0kb downstream 10.0kb downstream 10000 false Scaffold7867: 6428594-6438593 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363618 5261 Brassicaceae View MSA
123839836 5264 Brassicales-Malvales View MSA
124344783 5266 SBM View MSA
124253255 5268 Malvidae View MSA
124070061 5270 Rosid View MSA
123746911 5271 Pentapetalae View MSA
122790683 5272 Eudicot View MSA
122043643 5273 Angiosperm View MSA
121346702 5274 Embryophyte View MSA
123427843 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain