Gene : Bostr.7867s1084 B. stricta v1.2
Defline:  (1 of 1) PTHR31356:SF4 - L-ASCORBATE PEROXIDASE 6-RELATED Genomic Order:  1084
Name:  ? Bostr.7867s1084 Secondary Identifier:  ? PAC:30657815
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstricta PWY-2261 Boechera stricta pathologic  
Bstricta PWY-6959 Boechera stricta pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.7867s1084 0.5kb upstream 0.5kb upstream 3149 true Scaffold7867: 5495305-5498453 Boechera stricta
Bostr.7867s1084 0.5kb upstream 0.5kb upstream 500 false Scaffold7867: 5495305-5495804 Boechera stricta
Bostr.7867s1084 0.5kb downstream 0.5kb downstream 3149 true Scaffold7867: 5495805-5498953 Boechera stricta
Bostr.7867s1084 0.5kb downstream 0.5kb downstream 500 false Scaffold7867: 5498454-5498953 Boechera stricta
Bostr.7867s1084 1.0kb upstream 1.0kb upstream 3649 true Scaffold7867: 5494805-5498453 Boechera stricta
Bostr.7867s1084 1.0kb upstream 1.0kb upstream 1000 false Scaffold7867: 5494805-5495804 Boechera stricta
Bostr.7867s1084 1.0kb downstream 1.0kb downstream 3649 true Scaffold7867: 5495805-5499453 Boechera stricta
Bostr.7867s1084 1.0kb downstream 1.0kb downstream 1000 false Scaffold7867: 5498454-5499453 Boechera stricta
Bostr.7867s1084 2.0kb upstream 2.0kb upstream 4649 true Scaffold7867: 5493805-5498453 Boechera stricta
Bostr.7867s1084 2.0kb upstream 2.0kb upstream 2000 false Scaffold7867: 5493805-5495804 Boechera stricta
Bostr.7867s1084 2.0kb downstream 2.0kb downstream 4649 true Scaffold7867: 5495805-5500453 Boechera stricta
Bostr.7867s1084 2.0kb downstream 2.0kb downstream 2000 false Scaffold7867: 5498454-5500453 Boechera stricta
Bostr.7867s1084 5.0kb upstream 5.0kb upstream 7649 true Scaffold7867: 5490805-5498453 Boechera stricta
Bostr.7867s1084 5.0kb upstream 5.0kb upstream 5000 false Scaffold7867: 5490805-5495804 Boechera stricta
Bostr.7867s1084 5.0kb downstream 5.0kb downstream 7649 true Scaffold7867: 5495805-5503453 Boechera stricta
Bostr.7867s1084 5.0kb downstream 5.0kb downstream 5000 false Scaffold7867: 5498454-5503453 Boechera stricta
Bostr.7867s1084 10.0kb upstream 10.0kb upstream 12649 true Scaffold7867: 5485805-5498453 Boechera stricta
Bostr.7867s1084 10.0kb upstream 10.0kb upstream 10000 false Scaffold7867: 5485805-5495804 Boechera stricta
Bostr.7867s1084 10.0kb downstream 10.0kb downstream 12649 true Scaffold7867: 5495805-5508453 Boechera stricta
Bostr.7867s1084 10.0kb downstream 10.0kb downstream 10000 false Scaffold7867: 5498454-5508453 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367760 5261 Brassicaceae View MSA
123834237 5264 Brassicales-Malvales View MSA
124342158 5266 SBM View MSA
124239961 5268 Malvidae View MSA
124065739 5270 Rosid View MSA
123737315 5271 Pentapetalae View MSA
122787755 5272 Eudicot View MSA
122044466 5273 Angiosperm View MSA
121347690 5274 Embryophyte View MSA
123425529 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain