Gene : Bostr.7867s0976 B. stricta v1.2
Defline:  (1 of 2) 6.1.1.12 - Aspartate--tRNA ligase / Aspartyl-tRNA synthetase Genomic Order:  976
Name:  ? Bostr.7867s0976 Secondary Identifier:  ? PAC:30657429
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstricta TRNA-CHARGING-PWY Boechera stricta pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.7867s0976 0.5kb upstream 0.5kb upstream 3454 true Scaffold7867: 4974529-4977982 Boechera stricta
Bostr.7867s0976 0.5kb upstream 0.5kb upstream 500 false Scaffold7867: 4974529-4975028 Boechera stricta
Bostr.7867s0976 0.5kb downstream 0.5kb downstream 3454 true Scaffold7867: 4975029-4978482 Boechera stricta
Bostr.7867s0976 0.5kb downstream 0.5kb downstream 500 false Scaffold7867: 4977983-4978482 Boechera stricta
Bostr.7867s0976 1.0kb upstream 1.0kb upstream 3954 true Scaffold7867: 4974029-4977982 Boechera stricta
Bostr.7867s0976 1.0kb upstream 1.0kb upstream 1000 false Scaffold7867: 4974029-4975028 Boechera stricta
Bostr.7867s0976 1.0kb downstream 1.0kb downstream 3954 true Scaffold7867: 4975029-4978982 Boechera stricta
Bostr.7867s0976 1.0kb downstream 1.0kb downstream 1000 false Scaffold7867: 4977983-4978982 Boechera stricta
Bostr.7867s0976 2.0kb upstream 2.0kb upstream 4954 true Scaffold7867: 4973029-4977982 Boechera stricta
Bostr.7867s0976 2.0kb upstream 2.0kb upstream 2000 false Scaffold7867: 4973029-4975028 Boechera stricta
Bostr.7867s0976 2.0kb downstream 2.0kb downstream 4954 true Scaffold7867: 4975029-4979982 Boechera stricta
Bostr.7867s0976 2.0kb downstream 2.0kb downstream 2000 false Scaffold7867: 4977983-4979982 Boechera stricta
Bostr.7867s0976 5.0kb upstream 5.0kb upstream 7954 true Scaffold7867: 4970029-4977982 Boechera stricta
Bostr.7867s0976 5.0kb upstream 5.0kb upstream 5000 false Scaffold7867: 4970029-4975028 Boechera stricta
Bostr.7867s0976 5.0kb downstream 5.0kb downstream 7954 true Scaffold7867: 4975029-4982982 Boechera stricta
Bostr.7867s0976 5.0kb downstream 5.0kb downstream 5000 false Scaffold7867: 4977983-4982982 Boechera stricta
Bostr.7867s0976 10.0kb upstream 10.0kb upstream 12954 true Scaffold7867: 4965029-4977982 Boechera stricta
Bostr.7867s0976 10.0kb upstream 10.0kb upstream 10000 false Scaffold7867: 4965029-4975028 Boechera stricta
Bostr.7867s0976 10.0kb downstream 10.0kb downstream 12954 true Scaffold7867: 4975029-4987982 Boechera stricta
Bostr.7867s0976 10.0kb downstream 10.0kb downstream 10000 false Scaffold7867: 4977983-4987982 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373469 5261 Brassicaceae View MSA
123830124 5264 Brassicales-Malvales View MSA
124340774 5266 SBM View MSA
124240572 5268 Malvidae View MSA
124066804 5270 Rosid View MSA
123746132 5271 Pentapetalae View MSA
122792438 5272 Eudicot View MSA
122047949 5273 Angiosperm View MSA
121349506 5274 Embryophyte View MSA
123428007 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain