Gene : Bostr.9638s0080 B. stricta v1.2
Defline:  (1 of 3) PTHR20852//PTHR20852:SF59 - GLUTAMINE SYNTHETASE Genomic Order:  80
Name:  ? Bostr.9638s0080 Secondary Identifier:  ? PAC:30663361
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Ontology Annotation Displayer

6 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstricta GLNSYN-PWY Boechera stricta pathologic  
Bstricta PWY-3282 Boechera stricta pathologic  
Bstricta PWY-381 Boechera stricta pathologic  
Bstricta PWY-6549 Boechera stricta pathologic  
Bstricta PWY-6963 Boechera stricta pathologic  
Bstricta PWY-6964 Boechera stricta pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.9638s0080 0.5kb upstream 0.5kb upstream 3149 true Scaffold9638: 745979-749127 Boechera stricta
Bostr.9638s0080 0.5kb upstream 0.5kb upstream 500 false Scaffold9638: 748628-749127 Boechera stricta
Bostr.9638s0080 0.5kb downstream 0.5kb downstream 3149 true Scaffold9638: 745479-748627 Boechera stricta
Bostr.9638s0080 0.5kb downstream 0.5kb downstream 500 false Scaffold9638: 745479-745978 Boechera stricta
Bostr.9638s0080 1.0kb upstream 1.0kb upstream 3649 true Scaffold9638: 745979-749627 Boechera stricta
Bostr.9638s0080 1.0kb upstream 1.0kb upstream 1000 false Scaffold9638: 748628-749627 Boechera stricta
Bostr.9638s0080 1.0kb downstream 1.0kb downstream 3649 true Scaffold9638: 744979-748627 Boechera stricta
Bostr.9638s0080 1.0kb downstream 1.0kb downstream 1000 false Scaffold9638: 744979-745978 Boechera stricta
Bostr.9638s0080 2.0kb upstream 2.0kb upstream 4649 true Scaffold9638: 745979-750627 Boechera stricta
Bostr.9638s0080 2.0kb upstream 2.0kb upstream 2000 false Scaffold9638: 748628-750627 Boechera stricta
Bostr.9638s0080 2.0kb downstream 2.0kb downstream 4649 true Scaffold9638: 743979-748627 Boechera stricta
Bostr.9638s0080 2.0kb downstream 2.0kb downstream 2000 false Scaffold9638: 743979-745978 Boechera stricta
Bostr.9638s0080 5.0kb upstream 5.0kb upstream 7649 true Scaffold9638: 745979-753627 Boechera stricta
Bostr.9638s0080 5.0kb upstream 5.0kb upstream 5000 false Scaffold9638: 748628-753627 Boechera stricta
Bostr.9638s0080 5.0kb downstream 5.0kb downstream 7649 true Scaffold9638: 740979-748627 Boechera stricta
Bostr.9638s0080 5.0kb downstream 5.0kb downstream 5000 false Scaffold9638: 740979-745978 Boechera stricta
Bostr.9638s0080 10.0kb upstream 10.0kb upstream 12649 true Scaffold9638: 745979-758627 Boechera stricta
Bostr.9638s0080 10.0kb upstream 10.0kb upstream 10000 false Scaffold9638: 748628-758627 Boechera stricta
Bostr.9638s0080 10.0kb downstream 10.0kb downstream 12649 true Scaffold9638: 735979-748627 Boechera stricta
Bostr.9638s0080 10.0kb downstream 10.0kb downstream 10000 false Scaffold9638: 735979-745978 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378986 5261 Brassicaceae View MSA
123841665 5264 Brassicales-Malvales View MSA
124350836 5266 SBM View MSA
124245417 5268 Malvidae View MSA
124072083 5270 Rosid View MSA
123746903 5271 Pentapetalae View MSA
122794697 5272 Eudicot View MSA
122048815 5273 Angiosperm View MSA
121347129 5274 Embryophyte View MSA
123428761 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain