Gene : Bostr.9017s0003 B. stricta v1.2
Defline:  (1 of 20) PF14214 - Helitron helicase-like domain at N-terminus (Helitron_like_N) Genomic Order:  3
Name:  ? Bostr.9017s0003 Secondary Identifier:  ? PAC:30651708
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.9017s0003 0.5kb upstream 0.5kb upstream 3457 true Scaffold9017: 32440-35896 Boechera stricta
Bostr.9017s0003 0.5kb upstream 0.5kb upstream 500 false Scaffold9017: 32440-32939 Boechera stricta
Bostr.9017s0003 0.5kb downstream 0.5kb downstream 3457 true Scaffold9017: 32940-36396 Boechera stricta
Bostr.9017s0003 0.5kb downstream 0.5kb downstream 500 false Scaffold9017: 35897-36396 Boechera stricta
Bostr.9017s0003 1.0kb upstream 1.0kb upstream 3957 true Scaffold9017: 31940-35896 Boechera stricta
Bostr.9017s0003 1.0kb upstream 1.0kb upstream 1000 false Scaffold9017: 31940-32939 Boechera stricta
Bostr.9017s0003 1.0kb downstream 1.0kb downstream 3957 true Scaffold9017: 32940-36896 Boechera stricta
Bostr.9017s0003 1.0kb downstream 1.0kb downstream 1000 false Scaffold9017: 35897-36896 Boechera stricta
Bostr.9017s0003 2.0kb upstream 2.0kb upstream 4957 true Scaffold9017: 30940-35896 Boechera stricta
Bostr.9017s0003 2.0kb upstream 2.0kb upstream 2000 false Scaffold9017: 30940-32939 Boechera stricta
Bostr.9017s0003 2.0kb downstream 2.0kb downstream 4957 true Scaffold9017: 32940-37896 Boechera stricta
Bostr.9017s0003 2.0kb downstream 2.0kb downstream 2000 false Scaffold9017: 35897-37896 Boechera stricta
Bostr.9017s0003 5.0kb upstream 5.0kb upstream 7957 true Scaffold9017: 27940-35896 Boechera stricta
Bostr.9017s0003 5.0kb upstream 5.0kb upstream 5000 false Scaffold9017: 27940-32939 Boechera stricta
Bostr.9017s0003 5.0kb downstream 5.0kb downstream 7957 true Scaffold9017: 32940-40896 Boechera stricta
Bostr.9017s0003 5.0kb downstream 5.0kb downstream 5000 false Scaffold9017: 35897-40896 Boechera stricta
Bostr.9017s0003 10.0kb upstream 10.0kb upstream 12957 true Scaffold9017: 22940-35896 Boechera stricta
Bostr.9017s0003 10.0kb upstream 10.0kb upstream 10000 false Scaffold9017: 22940-32939 Boechera stricta
Bostr.9017s0003 10.0kb downstream 10.0kb downstream 12957 true Scaffold9017: 32940-45896 Boechera stricta
Bostr.9017s0003 10.0kb downstream 10.0kb downstream 10000 false Scaffold9017: 35897-45896 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029830 5273 Angiosperm View MSA
122339077 5261 Brassicaceae Singleton cluster - no MSA
123779587 5264 Brassicales-Malvales Singleton cluster - no MSA
124350603 5266 SBM View MSA
124252774 5268 Malvidae View MSA
124051325 5270 Rosid View MSA
123752824 5271 Pentapetalae View MSA
122797633 5272 Eudicot View MSA
121351580 5274 Embryophyte View MSA
123426292 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain