Gene : Bostr.7903s0125 B. stricta v1.2
Defline:  (1 of 1) PTHR11815 - SUCCINYL-COA SYNTHETASE BETA CHAIN Genomic Order:  125
Name:  ? Bostr.7903s0125 Secondary Identifier:  ? PAC:30678265
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstricta PWY-5464 Boechera stricta pathologic  
Bstricta PWY-5690 Boechera stricta pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.7903s0125 0.5kb upstream 0.5kb upstream 3206 true Scaffold7903: 549727-552932 Boechera stricta
Bostr.7903s0125 0.5kb upstream 0.5kb upstream 500 false Scaffold7903: 552433-552932 Boechera stricta
Bostr.7903s0125 0.5kb downstream 0.5kb downstream 3206 true Scaffold7903: 549227-552432 Boechera stricta
Bostr.7903s0125 0.5kb downstream 0.5kb downstream 500 false Scaffold7903: 549227-549726 Boechera stricta
Bostr.7903s0125 1.0kb upstream 1.0kb upstream 3706 true Scaffold7903: 549727-553432 Boechera stricta
Bostr.7903s0125 1.0kb upstream 1.0kb upstream 1000 false Scaffold7903: 552433-553432 Boechera stricta
Bostr.7903s0125 1.0kb downstream 1.0kb downstream 3706 true Scaffold7903: 548727-552432 Boechera stricta
Bostr.7903s0125 1.0kb downstream 1.0kb downstream 1000 false Scaffold7903: 548727-549726 Boechera stricta
Bostr.7903s0125 2.0kb upstream 2.0kb upstream 4706 true Scaffold7903: 549727-554432 Boechera stricta
Bostr.7903s0125 2.0kb upstream 2.0kb upstream 2000 false Scaffold7903: 552433-554432 Boechera stricta
Bostr.7903s0125 2.0kb downstream 2.0kb downstream 4706 true Scaffold7903: 547727-552432 Boechera stricta
Bostr.7903s0125 2.0kb downstream 2.0kb downstream 2000 false Scaffold7903: 547727-549726 Boechera stricta
Bostr.7903s0125 5.0kb upstream 5.0kb upstream 7706 true Scaffold7903: 549727-557432 Boechera stricta
Bostr.7903s0125 5.0kb upstream 5.0kb upstream 5000 false Scaffold7903: 552433-557432 Boechera stricta
Bostr.7903s0125 5.0kb downstream 5.0kb downstream 7706 true Scaffold7903: 544727-552432 Boechera stricta
Bostr.7903s0125 5.0kb downstream 5.0kb downstream 5000 false Scaffold7903: 544727-549726 Boechera stricta
Bostr.7903s0125 10.0kb upstream 10.0kb upstream 12706 true Scaffold7903: 549727-562432 Boechera stricta
Bostr.7903s0125 10.0kb upstream 10.0kb upstream 10000 false Scaffold7903: 552433-562432 Boechera stricta
Bostr.7903s0125 10.0kb downstream 10.0kb downstream 12706 true Scaffold7903: 539727-552432 Boechera stricta
Bostr.7903s0125 10.0kb downstream 10.0kb downstream 10000 false Scaffold7903: 539727-549726 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368823 5261 Brassicaceae View MSA
123831519 5264 Brassicales-Malvales View MSA
124339342 5266 SBM View MSA
124251399 5268 Malvidae View MSA
124060872 5270 Rosid View MSA
123742087 5271 Pentapetalae View MSA
122792279 5272 Eudicot View MSA
122051444 5273 Angiosperm View MSA
121345383 5274 Embryophyte View MSA
123424499 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain