Gene : Bostr.7867s1637 B. stricta v1.2
Defline:  (1 of 5) 1.14.13.132 - Squalene monooxygenase / Squalene epoxidase Genomic Order:  1637
Name:  ? Bostr.7867s1637 Secondary Identifier:  ? PAC:30658303
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstricta PWY-2541 Boechera stricta pathologic  
Bstricta PWY-5670 Boechera stricta pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.7867s1637 0.5kb upstream 0.5kb upstream 3309 true Scaffold7867: 8301825-8305133 Boechera stricta
Bostr.7867s1637 0.5kb upstream 0.5kb upstream 500 false Scaffold7867: 8301825-8302324 Boechera stricta
Bostr.7867s1637 0.5kb downstream 0.5kb downstream 3309 true Scaffold7867: 8302325-8305633 Boechera stricta
Bostr.7867s1637 0.5kb downstream 0.5kb downstream 500 false Scaffold7867: 8305134-8305633 Boechera stricta
Bostr.7867s1637 1.0kb upstream 1.0kb upstream 3809 true Scaffold7867: 8301325-8305133 Boechera stricta
Bostr.7867s1637 1.0kb upstream 1.0kb upstream 1000 false Scaffold7867: 8301325-8302324 Boechera stricta
Bostr.7867s1637 1.0kb downstream 1.0kb downstream 3809 true Scaffold7867: 8302325-8306133 Boechera stricta
Bostr.7867s1637 1.0kb downstream 1.0kb downstream 1000 false Scaffold7867: 8305134-8306133 Boechera stricta
Bostr.7867s1637 2.0kb upstream 2.0kb upstream 4809 true Scaffold7867: 8300325-8305133 Boechera stricta
Bostr.7867s1637 2.0kb upstream 2.0kb upstream 2000 false Scaffold7867: 8300325-8302324 Boechera stricta
Bostr.7867s1637 2.0kb downstream 2.0kb downstream 4809 true Scaffold7867: 8302325-8307133 Boechera stricta
Bostr.7867s1637 2.0kb downstream 2.0kb downstream 2000 false Scaffold7867: 8305134-8307133 Boechera stricta
Bostr.7867s1637 5.0kb upstream 5.0kb upstream 7809 true Scaffold7867: 8297325-8305133 Boechera stricta
Bostr.7867s1637 5.0kb upstream 5.0kb upstream 5000 false Scaffold7867: 8297325-8302324 Boechera stricta
Bostr.7867s1637 5.0kb downstream 5.0kb downstream 7809 true Scaffold7867: 8302325-8310133 Boechera stricta
Bostr.7867s1637 5.0kb downstream 5.0kb downstream 5000 false Scaffold7867: 8305134-8310133 Boechera stricta
Bostr.7867s1637 10.0kb upstream 10.0kb upstream 12809 true Scaffold7867: 8292325-8305133 Boechera stricta
Bostr.7867s1637 10.0kb upstream 10.0kb upstream 10000 false Scaffold7867: 8292325-8302324 Boechera stricta
Bostr.7867s1637 10.0kb downstream 10.0kb downstream 12809 true Scaffold7867: 8302325-8315133 Boechera stricta
Bostr.7867s1637 10.0kb downstream 10.0kb downstream 10000 false Scaffold7867: 8305134-8315133 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122380334 5261 Brassicaceae View MSA
123838211 5264 Brassicales-Malvales View MSA
124342457 5266 SBM View MSA
124254451 5268 Malvidae View MSA
124072398 5270 Rosid View MSA
123747368 5271 Pentapetalae View MSA
122788930 5272 Eudicot View MSA
122042003 5273 Angiosperm View MSA
121344187 5274 Embryophyte View MSA
123428498 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain