Gene : Bostr.10273s0095 B. stricta v1.2
Defline:  (1 of 1) PTHR10947 - PHENYLALANYL-TRNA SYNTHETASE BETA CHAIN AND LEUCINE-RICH REPEAT-CONTAINING PROTEIN 47 Genomic Order:  95
Name:  ? Bostr.10273s0095 Secondary Identifier:  ? PAC:30656579
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstricta TRNA-CHARGING-PWY Boechera stricta pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.10273s0095 0.5kb upstream 0.5kb upstream 5026 true Scaffold10273: 456580-461605 Boechera stricta
Bostr.10273s0095 0.5kb upstream 0.5kb upstream 500 false Scaffold10273: 456580-457079 Boechera stricta
Bostr.10273s0095 0.5kb downstream 0.5kb downstream 5026 true Scaffold10273: 457080-462105 Boechera stricta
Bostr.10273s0095 0.5kb downstream 0.5kb downstream 500 false Scaffold10273: 461606-462105 Boechera stricta
Bostr.10273s0095 1.0kb upstream 1.0kb upstream 5526 true Scaffold10273: 456080-461605 Boechera stricta
Bostr.10273s0095 1.0kb upstream 1.0kb upstream 1000 false Scaffold10273: 456080-457079 Boechera stricta
Bostr.10273s0095 1.0kb downstream 1.0kb downstream 5526 true Scaffold10273: 457080-462605 Boechera stricta
Bostr.10273s0095 1.0kb downstream 1.0kb downstream 1000 false Scaffold10273: 461606-462605 Boechera stricta
Bostr.10273s0095 2.0kb upstream 2.0kb upstream 6526 true Scaffold10273: 455080-461605 Boechera stricta
Bostr.10273s0095 2.0kb upstream 2.0kb upstream 2000 false Scaffold10273: 455080-457079 Boechera stricta
Bostr.10273s0095 2.0kb downstream 2.0kb downstream 6526 true Scaffold10273: 457080-463605 Boechera stricta
Bostr.10273s0095 2.0kb downstream 2.0kb downstream 2000 false Scaffold10273: 461606-463605 Boechera stricta
Bostr.10273s0095 5.0kb upstream 5.0kb upstream 9526 true Scaffold10273: 452080-461605 Boechera stricta
Bostr.10273s0095 5.0kb upstream 5.0kb upstream 5000 false Scaffold10273: 452080-457079 Boechera stricta
Bostr.10273s0095 5.0kb downstream 5.0kb downstream 9526 true Scaffold10273: 457080-466605 Boechera stricta
Bostr.10273s0095 5.0kb downstream 5.0kb downstream 5000 false Scaffold10273: 461606-466605 Boechera stricta
Bostr.10273s0095 10.0kb upstream 10.0kb upstream 14526 true Scaffold10273: 447080-461605 Boechera stricta
Bostr.10273s0095 10.0kb upstream 10.0kb upstream 10000 false Scaffold10273: 447080-457079 Boechera stricta
Bostr.10273s0095 10.0kb downstream 10.0kb downstream 14526 true Scaffold10273: 457080-471605 Boechera stricta
Bostr.10273s0095 10.0kb downstream 10.0kb downstream 10000 false Scaffold10273: 461606-471605 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361573 5261 Brassicaceae View MSA
123834957 5264 Brassicales-Malvales View MSA
124339817 5266 SBM View MSA
124238696 5268 Malvidae View MSA
124062601 5270 Rosid View MSA
123738962 5271 Pentapetalae View MSA
122792851 5272 Eudicot View MSA
122042437 5273 Angiosperm View MSA
121345306 5274 Embryophyte View MSA
123425015 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain