Gene : Bostr.10180s0008 B. stricta v1.2
Defline:  (1 of 1) PTHR30603:SF14 - RNA POLYMERASE SIGMA FACTOR SIGA Genomic Order:  8
Name:  ? Bostr.10180s0008 Secondary Identifier:  ? PAC:30676867
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.10180s0008 0.5kb upstream 0.5kb upstream 3550 true Scaffold10180: 98496-102045 Boechera stricta
Bostr.10180s0008 0.5kb upstream 0.5kb upstream 500 false Scaffold10180: 98496-98995 Boechera stricta
Bostr.10180s0008 0.5kb downstream 0.5kb downstream 3550 true Scaffold10180: 98996-102545 Boechera stricta
Bostr.10180s0008 0.5kb downstream 0.5kb downstream 500 false Scaffold10180: 102046-102545 Boechera stricta
Bostr.10180s0008 1.0kb upstream 1.0kb upstream 4050 true Scaffold10180: 97996-102045 Boechera stricta
Bostr.10180s0008 1.0kb upstream 1.0kb upstream 1000 false Scaffold10180: 97996-98995 Boechera stricta
Bostr.10180s0008 1.0kb downstream 1.0kb downstream 4050 true Scaffold10180: 98996-103045 Boechera stricta
Bostr.10180s0008 1.0kb downstream 1.0kb downstream 1000 false Scaffold10180: 102046-103045 Boechera stricta
Bostr.10180s0008 2.0kb upstream 2.0kb upstream 5050 true Scaffold10180: 96996-102045 Boechera stricta
Bostr.10180s0008 2.0kb upstream 2.0kb upstream 2000 false Scaffold10180: 96996-98995 Boechera stricta
Bostr.10180s0008 2.0kb downstream 2.0kb downstream 5050 true Scaffold10180: 98996-104045 Boechera stricta
Bostr.10180s0008 2.0kb downstream 2.0kb downstream 2000 false Scaffold10180: 102046-104045 Boechera stricta
Bostr.10180s0008 5.0kb upstream 5.0kb upstream 8050 true Scaffold10180: 93996-102045 Boechera stricta
Bostr.10180s0008 5.0kb upstream 5.0kb upstream 5000 false Scaffold10180: 93996-98995 Boechera stricta
Bostr.10180s0008 5.0kb downstream 5.0kb downstream 5243 true Scaffold10180: 98996-104238 Boechera stricta
Bostr.10180s0008 5.0kb downstream 5.0kb downstream 2193 false Scaffold10180: 102046-104238 Boechera stricta
Bostr.10180s0008 10.0kb upstream 10.0kb upstream 13050 true Scaffold10180: 88996-102045 Boechera stricta
Bostr.10180s0008 10.0kb upstream 10.0kb upstream 10000 false Scaffold10180: 88996-98995 Boechera stricta
Bostr.10180s0008 10.0kb downstream 10.0kb downstream 5243 true Scaffold10180: 98996-104238 Boechera stricta
Bostr.10180s0008 10.0kb downstream 10.0kb downstream 2193 false Scaffold10180: 102046-104238 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364067 5261 Brassicaceae View MSA
123834541 5264 Brassicales-Malvales View MSA
124340629 5266 SBM View MSA
124240953 5268 Malvidae View MSA
124062387 5270 Rosid View MSA
123751324 5271 Pentapetalae View MSA
122790966 5272 Eudicot View MSA
122043866 5273 Angiosperm View MSA
121344219 5274 Embryophyte View MSA
123380005 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain