Gene : Bostr.10040s0117 B. stricta v1.2

Defline:  (1 of 5) PTHR11800:SF13 - DNA-DIRECTED RNA POLYMERASES I AND III SUBUNIT RPAC1 Genomic Order:  117
Name:  ? Bostr.10040s0117 Secondary Identifier:  ? PAC:30669841

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.10040s0117 0.5kb upstream 0.5kb upstream 1926 true Scaffold10040: 1051321-1053246 Boechera stricta
Bostr.10040s0117 0.5kb upstream 0.5kb upstream 500 false Scaffold10040: 1052747-1053246 Boechera stricta
Bostr.10040s0117 0.5kb downstream 0.5kb downstream 1926 true Scaffold10040: 1050821-1052746 Boechera stricta
Bostr.10040s0117 0.5kb downstream 0.5kb downstream 500 false Scaffold10040: 1050821-1051320 Boechera stricta
Bostr.10040s0117 1.0kb upstream 1.0kb upstream 2426 true Scaffold10040: 1051321-1053746 Boechera stricta
Bostr.10040s0117 1.0kb upstream 1.0kb upstream 1000 false Scaffold10040: 1052747-1053746 Boechera stricta
Bostr.10040s0117 1.0kb downstream 1.0kb downstream 2426 true Scaffold10040: 1050321-1052746 Boechera stricta
Bostr.10040s0117 1.0kb downstream 1.0kb downstream 1000 false Scaffold10040: 1050321-1051320 Boechera stricta
Bostr.10040s0117 2.0kb upstream 2.0kb upstream 3426 true Scaffold10040: 1051321-1054746 Boechera stricta
Bostr.10040s0117 2.0kb upstream 2.0kb upstream 2000 false Scaffold10040: 1052747-1054746 Boechera stricta
Bostr.10040s0117 2.0kb downstream 2.0kb downstream 3426 true Scaffold10040: 1049321-1052746 Boechera stricta
Bostr.10040s0117 2.0kb downstream 2.0kb downstream 2000 false Scaffold10040: 1049321-1051320 Boechera stricta
Bostr.10040s0117 5.0kb upstream 5.0kb upstream 6426 true Scaffold10040: 1051321-1057746 Boechera stricta
Bostr.10040s0117 5.0kb upstream 5.0kb upstream 5000 false Scaffold10040: 1052747-1057746 Boechera stricta
Bostr.10040s0117 5.0kb downstream 5.0kb downstream 6426 true Scaffold10040: 1046321-1052746 Boechera stricta
Bostr.10040s0117 5.0kb downstream 5.0kb downstream 5000 false Scaffold10040: 1046321-1051320 Boechera stricta
Bostr.10040s0117 10.0kb upstream 10.0kb upstream 11426 true Scaffold10040: 1051321-1062746 Boechera stricta
Bostr.10040s0117 10.0kb upstream 10.0kb upstream 10000 false Scaffold10040: 1052747-1062746 Boechera stricta
Bostr.10040s0117 10.0kb downstream 10.0kb downstream 11426 true Scaffold10040: 1041321-1052746 Boechera stricta
Bostr.10040s0117 10.0kb downstream 10.0kb downstream 10000 false Scaffold10040: 1041321-1051320 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121525293 5273 Angiosperm View MSA
122343072 5261 Brassicaceae View MSA
123841408 5264 Brassicales-Malvales View MSA
124322923 5266 SBM View MSA
124169262 5268 Malvidae View MSA
123892327 5270 Rosid View MSA
123474483 5271 Pentapetalae View MSA
122509755 5272 Eudicot View MSA
120798060 5274 Embryophyte View MSA
122839619 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain