Gene : Bostr.10273s0309 B. stricta v1.2
Defline:  (1 of 2) PTHR31375:SF29 - PECTIN LYASE-LIKE PROTEIN-RELATED Genomic Order:  309
Name:  ? Bostr.10273s0309 Secondary Identifier:  ? PAC:30656705
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstricta PWY-1081 Boechera stricta pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.10273s0309 0.5kb upstream 0.5kb upstream 2808 true Scaffold10273: 1741736-1744543 Boechera stricta
Bostr.10273s0309 0.5kb upstream 0.5kb upstream 500 false Scaffold10273: 1741736-1742235 Boechera stricta
Bostr.10273s0309 0.5kb downstream 0.5kb downstream 2808 true Scaffold10273: 1742236-1745043 Boechera stricta
Bostr.10273s0309 0.5kb downstream 0.5kb downstream 500 false Scaffold10273: 1744544-1745043 Boechera stricta
Bostr.10273s0309 1.0kb upstream 1.0kb upstream 3308 true Scaffold10273: 1741236-1744543 Boechera stricta
Bostr.10273s0309 1.0kb upstream 1.0kb upstream 1000 false Scaffold10273: 1741236-1742235 Boechera stricta
Bostr.10273s0309 1.0kb downstream 1.0kb downstream 3308 true Scaffold10273: 1742236-1745543 Boechera stricta
Bostr.10273s0309 1.0kb downstream 1.0kb downstream 1000 false Scaffold10273: 1744544-1745543 Boechera stricta
Bostr.10273s0309 2.0kb upstream 2.0kb upstream 4308 true Scaffold10273: 1740236-1744543 Boechera stricta
Bostr.10273s0309 2.0kb upstream 2.0kb upstream 2000 false Scaffold10273: 1740236-1742235 Boechera stricta
Bostr.10273s0309 2.0kb downstream 2.0kb downstream 4308 true Scaffold10273: 1742236-1746543 Boechera stricta
Bostr.10273s0309 2.0kb downstream 2.0kb downstream 2000 false Scaffold10273: 1744544-1746543 Boechera stricta
Bostr.10273s0309 5.0kb upstream 5.0kb upstream 7308 true Scaffold10273: 1737236-1744543 Boechera stricta
Bostr.10273s0309 5.0kb upstream 5.0kb upstream 5000 false Scaffold10273: 1737236-1742235 Boechera stricta
Bostr.10273s0309 5.0kb downstream 5.0kb downstream 7308 true Scaffold10273: 1742236-1749543 Boechera stricta
Bostr.10273s0309 5.0kb downstream 5.0kb downstream 5000 false Scaffold10273: 1744544-1749543 Boechera stricta
Bostr.10273s0309 10.0kb upstream 10.0kb upstream 12308 true Scaffold10273: 1732236-1744543 Boechera stricta
Bostr.10273s0309 10.0kb upstream 10.0kb upstream 10000 false Scaffold10273: 1732236-1742235 Boechera stricta
Bostr.10273s0309 10.0kb downstream 10.0kb downstream 12308 true Scaffold10273: 1742236-1754543 Boechera stricta
Bostr.10273s0309 10.0kb downstream 10.0kb downstream 10000 false Scaffold10273: 1744544-1754543 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370843 5261 Brassicaceae View MSA
123841126 5264 Brassicales-Malvales View MSA
124345334 5266 SBM View MSA
124254286 5268 Malvidae View MSA
124062237 5270 Rosid View MSA
123747899 5271 Pentapetalae View MSA
122789338 5272 Eudicot View MSA
122047278 5273 Angiosperm View MSA
121350352 5274 Embryophyte View MSA
123381691 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain